C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 20 (phosphate transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144136 SLC20A1 9606 + 2:112645857-112663827 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272542 SLC20A1-001 112645857-112663827 protein_coding
  ENST00000413135 SLC20A1-009 112647718-112659428 nonsense_mediated_decay
  ENST00000423633 SLC20A1-005 112647447-112653355 protein_coding
  ENST00000433924 SLC20A1-008 112647702-112659443 protein_coding
  ENST00000456264 SLC20A1-006 112647704-112659087 nonsense_mediated_decay
  ENST00000480984 SLC20A1-010 112651946-112659327 processed_transcript
  ENST00000490674 SLC20A1-003 112658363-112663825 retained_intron
  ENST00000492076 SLC20A1-007 112652270-112652972 retained_intron
  ENST00000498224 SLC20A1-004 112647623-112659292 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272542ENST00000433924ENST00000490674
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272542 5.153±0.00 1.613±0.00 10.766±0.00 3.819±1.58 5.532±4.19 1.305±1.08 2.349±0.50 1.286±0.00 6.299±2.12 N/A 13.163±7.39 12.299±2.98 5.644±3.45
ENST00000433924 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.329±0.00 N/A N/A N/A
ENST00000490674 N/A N/A N/A N/A 1.789±0.00 N/A N/A N/A 2.345±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018Z CIL_00018Z_0001 CGP 2:112584240-112663827

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0004872 TAS receptor activity
GO:0005315 IEA inorganic phosphate transmembrane transporter activity
GO:0005316 IEA high affinity inorganic phosphate:sodium symporter activity
GO:0005436 TAS sodium:phosphate symporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006796 TAS phosphate-containing compound metabolic process
GO:0006810 TAS transport
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006817 IEA phosphate ion transport
GO:0007165 IMP signal transduction
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035435 TAS phosphate ion transmembrane transport
GO:0035725 TAS sodium ion transmembrane transport
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010641 slc20a1b solute carrier family 20, member 1b protein_coding Danio_rerio
ENSDARG00000020114 slc20a1a solute carrier family 20, member 1a protein_coding Danio_rerio
ENSMUSG00000027397 Slc20a1 solute carrier family 20, member 1 protein_coding Mus_musculus

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