C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 20 (phosphate transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272542 SLC20A1-001 ENSG00000144136 9606 + 2:112645857-112663827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000272542
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000272542 5.153±0.00 1.613±0.00 10.766±0.00 3.819±1.58 5.532±4.19 1.305±1.08 2.349±0.50 1.286±0.00 6.299±2.12 13.163±7.39 12.299±2.98 5.644±3.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018Z CIL_00018Z_0001 CGP 2:112584240-112663827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0004872 TAS receptor activity
GO:0005315 IEA inorganic phosphate transmembrane transporter activity
GO:0005316 IEA high affinity inorganic phosphate:sodium symporter activity
GO:0005436 TAS sodium:phosphate symporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006796 TAS phosphate-containing compound metabolic process
GO:0006810 TAS transport
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006817 IEA phosphate ion transport
GO:0007165 IMP signal transduction
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035435 TAS phosphate ion transmembrane transport
GO:0035725 TAS sodium ion transmembrane transport
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028880 Slc20a1-001 protein_coding Mus_musculus 0 3371
ENSMUST00000110315 Slc20a1-004 protein_coding Mus_musculus 0 3284
ENSMUST00000141285 Slc20a1-005 processed_transcript Mus_musculus 0 1197
ENSMUST00000140907 Slc20a1-002 retained_intron Mus_musculus 0 1072
ENSMUST00000125714 Slc20a1-007 retained_intron Mus_musculus 0 819
ENSMUST00000144744 Slc20a1-003 retained_intron Mus_musculus 0 749
ENSMUST00000148988 Slc20a1-006 protein_coding Mus_musculus 0 226

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