C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125611-ENSG00000144136 CGP 9606 2:112584240-112663827
GeneTranscriptPositionBiotype
ENSG00000125611 (CHCHD5)
coiled-coil-helix-coiled-coil-helix domain containing 5 		ENST00000324913 (CHCHD5-001) 112584441-112589040 protein_coding
ENST00000409719 (CHCHD5-003) 112584595-112589275 protein_coding
ENST00000454841 (CHCHD5-002) 112584469-112589040 nonsense_mediated_decay
ENST00000469030 (CHCHD5-005) 112584872-112589040 processed_transcript
ENST00000489052 (CHCHD5-004) 112584240-112586365 processed_transcript
ENSG00000144136 (SLC20A1)
solute carrier family 20 (phosphate transporter), member 1 		ENST00000272542 (SLC20A1-001) 112645857-112663827 protein_coding
ENST00000413135 (SLC20A1-009) 112647718-112659428 nonsense_mediated_decay
ENST00000423633 (SLC20A1-005) 112647447-112653355 protein_coding
ENST00000433924 (SLC20A1-008) 112647702-112659443 protein_coding
ENST00000456264 (SLC20A1-006) 112647704-112659087 nonsense_mediated_decay
ENST00000480984 (SLC20A1-010) 112651946-112659327 processed_transcript
ENST00000490674 (SLC20A1-003) 112658363-112663825 retained_intron
ENST00000492076 (SLC20A1-007) 112652270-112652972 retained_intron
ENST00000498224 (SLC20A1-004) 112647623-112659292 retained_intron
ENSG00000228251 (AC012442.6)
 ENST00000436885 (AC012442.6-001) 112590796-112591939 lincRNA
ENSG00000231747 (AC079922.2)
 ENST00000443291 (AC079922.2-001) 112621809-112622167 processed_pseudogene
ENSG00000237753 (FLJ42351)
uncharacterized LOC400999 		ENST00000457336 (FLJ42351-001) 112641832-112645690 lincRNA
ENSG00000243389 (AC012442.5)
 ENST00000414784 (AC012442.5-001) 112589040-112614431 3prime_overlapping_ncrna
CIL_00018Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037938-ENSMUSG00000027397 CGP 10090 2:129129700-129211616
GeneTranscriptPositionBiotype
ENSMUSG00000027397 (Slc20a1)
solute carrier family 20, member 1 		ENSMUST00000028880 (Slc20a1-001) 129198764-129211616 protein_coding
ENSMUST00000110315 (Slc20a1-004) 129199310-129211609 protein_coding
ENSMUST00000125714 (Slc20a1-007) 129206320-129208258 retained_intron
ENSMUST00000140907 (Slc20a1-002) 129198801-129201178 retained_intron
ENSMUST00000141285 (Slc20a1-005) 129198803-129205104 processed_transcript
ENSMUST00000144025 (Slc20a1-008) 129207360-129208026 retained_intron
ENSMUST00000144744 (Slc20a1-003) 129198803-129201176 retained_intron
ENSMUST00000148988 (Slc20a1-006) 129199144-129199816 protein_coding
ENSMUSG00000037938 (Chchd5)
coiled-coil-helix-coiled-coil-helix domain containing 5 		ENSMUST00000035481 (Chchd5-001) 129129700-129134134 protein_coding
ENSMUST00000137881 (Chchd5-002) 129129850-129133480 retained_intron
ENSMUST00000149118 (Chchd5-003) 129129804-129134013 processed_transcript
ENSMUSG00000082274 (Gm14026)
predicted gene 14026 		ENSMUST00000120625 (Gm14026-001) 129168700-129170488 processed_pseudogene
ENSMUSG00000084826 (AI847159)
expressed sequence AI847159 		ENSMUST00000137728 (AI847159-004) 129178152-129178541 antisense
ENSMUST00000138431 (AI847159-002) 129178196-129180667 antisense
ENSMUST00000141786 (AI847159-003) 129178148-129180632 antisense
ENSMUST00000148997 (AI847159-001) 129158666-129180632 antisense
ENSMUSG00000086652 (Gm14029)
predicted gene 14029 		ENSMUST00000151051 (Gm14029-001) 129182482-129183947 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018Z_0001ENSG00000125611ENST00000324913ENST00000409719ENST00000454841ENST00000469030ENST00000489052ENSG00000144136ENST00000272542ENST00000413135ENST00000423633ENST00000433924ENST00000456264ENST00000480984ENST00000490674ENST00000492076ENST00000498224ENSG00000228251ENST00000436885ENSG00000231747ENST00000443291ENSG00000237753ENST00000457336ENSG00000243389ENST00000414784CIL_00018Z_0002ENSMUSG00000027397ENSMUST00000028880ENSMUST00000110315ENSMUST00000125714ENSMUST00000140907ENSMUST00000141285ENSMUST00000144025ENSMUST00000144744ENSMUST00000148988ENSMUSG00000037938ENSMUST00000035481ENSMUST00000137881ENSMUST00000149118ENSMUSG00000082274ENSMUST00000120625ENSMUSG00000084826ENSMUST00000137728ENSMUST00000138431ENSMUST00000141786ENSMUST00000148997ENSMUSG00000086652ENSMUST00000151051
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018Z_0001ENSG00000125611ENST00000324913ENST00000409719ENST00000469030ENST00000489052ENSG00000144136ENST00000272542ENST00000433924ENST00000490674ENSG00000228251ENST00000436885ENSG00000231747ENST00000443291ENSG00000237753ENST00000457336ENSG00000243389ENST00000414784CIL_00018Z_0002ENSMUSG00000027397ENSMUST00000028880ENSMUST00000110315ENSMUST00000140907ENSMUST00000141285ENSMUSG00000037938ENSMUST00000035481ENSMUST00000137881ENSMUST00000149118ENSMUSG00000082274ENSMUST00000120625ENSMUSG00000084826ENSMUST00000137728ENSMUST00000138431ENSMUST00000141786ENSMUST00000148997ENSMUSG00000086652ENSMUST00000151051
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125611 ENST00000324913 5.413±0.00 10.127±0.00 0.225±0.00 5.975±5.45 8.912±0.00 4.531±3.13 8.484±0.00 12.382±0.00 12.084±0.00 7.838±0.00 5.499±0.00 12.605±8.39 5.659±3.06 16.947±0.00
ENST00000409719 N/A N/A 0.026±0.00 N/A 0.041±0.00 0.168±0.00 N/A N/A N/A N/A N/A 0.240±0.22 N/A N/A
ENST00000454841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469030 17.773±0.00 13.799±0.00 N/A 0.212±0.00 9.270±7.95 5.594±0.00 1.098±0.00 4.950±4.09 3.675±2.75 6.864±0.00 11.236±0.00 9.239±5.88 13.580±4.86 22.958±0.00
ENST00000489052 N/A N/A 0.138±0.00 0.213±0.00 N/A N/A N/A N/A N/A 2.915±0.00 N/A N/A 2.447±0.00 15.087±0.00
ENSG00000144136 ENST00000272542 N/A 5.153±0.00 1.613±0.00 10.766±0.00 3.819±1.58 5.532±4.19 1.305±1.08 2.349±0.50 1.286±0.00 6.299±2.12 N/A 13.163±7.39 12.299±2.98 5.644±3.45
ENST00000413135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.329±0.00 N/A N/A N/A
ENST00000456264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490674 N/A N/A N/A N/A N/A 1.789±0.00 N/A N/A N/A 2.345±0.00 N/A N/A N/A N/A
ENST00000492076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228251 ENST00000436885 0.492±0.00 0.351±0.00 N/A 0.144±0.03 0.457±0.00 0.245±0.00 0.356±0.18 0.513±0.00 0.289±0.00 0.421±0.33 0.916±0.75 0.387±0.03 0.186±0.05 0.364±0.19
ENSG00000231747 ENST00000443291 0.273±0.00 0.289±0.00 N/A N/A 0.245±0.00 N/A 0.119±0.03 0.041±0.00 0.072±0.00 0.234±0.00 0.215±0.00 0.243±0.21 0.125±0.04 0.181±0.00
ENSG00000237753 ENST00000457336 0.102±0.00 0.300±0.00 N/A 0.643±0.41 0.453±0.10 0.305±0.14 0.229±0.12 0.198±0.00 0.197±0.00 0.177±0.00 1.159±0.13 0.406±0.13 0.206±0.08 0.840±0.51
ENSG00000243389 ENST00000414784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.833±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027397 ENSMUST00000028880 5.747±0.41 3.349±1.04 3.015±0.04 12.724±3.19 8.780±1.57 63.203±20.61 2.341±1.20 4.547±0.92 16.248±14.84 7.737±0.81 1.528±0.40 8.247±1.71 29.791±14.66 3.281±1.32
ENSMUST00000110315 N/A N/A N/A N/A 3.446±0.00 N/A N/A N/A 9.377±0.00 N/A N/A N/A N/A 2.569±0.32
ENSMUST00000125714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140907 N/A 5.931±2.19 N/A N/A N/A 22.432±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141285 3.732±0.75 1.777±0.11 4.240±0.22 7.613±0.50 6.364±1.68 38.597±7.58 4.033±0.65 2.353±0.33 6.466±5.96 6.399±0.56 2.624±0.51 6.089±0.96 N/A 1.402±0.05
ENSMUST00000144025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037938 ENSMUST00000035481 11.652±0.82 48.262±3.57 8.193±0.67 6.971±2.60 15.017±5.45 19.954±5.68 7.794±1.59 18.852±0.49 16.116±8.53 10.986±0.63 4.188±0.54 18.973±7.13 9.214±2.30 6.451±2.67
ENSMUST00000137881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.744±0.00 N/A
ENSMUST00000149118 N/A N/A N/A N/A 7.946±0.00 N/A N/A N/A N/A N/A N/A 3.502±0.00 N/A N/A
ENSMUSG00000082274 ENSMUST00000120625 0.165±0.08 0.072±0.00 0.068±0.04 0.152±0.05 0.100±0.05 0.076±0.03 0.089±0.03 0.076±0.06 0.134±0.11 0.059±0.00 0.041±0.02 0.091±0.10 0.036±0.01 0.031±0.02
ENSMUSG00000084826 ENSMUST00000137728 N/A N/A N/A N/A 0.809±0.00 0.334±0.00 N/A N/A 0.140±0.00 N/A N/A N/A 0.253±0.00 0.067±0.00
ENSMUST00000138431 0.086±0.02 N/A N/A N/A 0.239±0.16 0.124±0.04 0.036±0.00 0.106±0.08 N/A 0.114±0.06 N/A 0.185±0.08 N/A 0.063±0.02
ENSMUST00000141786 0.074±0.07 N/A 0.260±0.00 0.073±0.07 0.394±0.13 0.186±0.00 N/A N/A 0.051±0.02 N/A 0.072±0.05 0.125±0.06 0.057±0.04 0.086±0.01
ENSMUST00000148997 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A 0.063±0.00 0.059±0.00
ENSMUSG00000086652 ENSMUST00000151051 0.212±0.15 0.056±0.00 0.402±0.05 0.059±0.05 0.557±0.13 0.086±0.04 0.036±0.01 0.052±0.03 0.035±0.02 0.133±0.03 0.095±0.08 0.108±0.04 0.053±0.03 0.019±0.01

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