C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 20, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027397 Slc20a1 10090 + 2:129198764-129211616 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028880 Slc20a1-001 129198764-129211616 protein_coding
  ENSMUST00000110315 Slc20a1-004 129199310-129211609 protein_coding
  ENSMUST00000125714 Slc20a1-007 129206320-129208258 retained_intron
  ENSMUST00000140907 Slc20a1-002 129198801-129201178 retained_intron
  ENSMUST00000141285 Slc20a1-005 129198803-129205104 processed_transcript
  ENSMUST00000144025 Slc20a1-008 129207360-129208026 retained_intron
  ENSMUST00000144744 Slc20a1-003 129198803-129201176 retained_intron
  ENSMUST00000148988 Slc20a1-006 129199144-129199816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028880ENSMUST00000110315ENSMUST00000140907ENSMUST00000141285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028880 5.747±0.41 3.349±1.04 3.015±0.04 12.724±3.19 8.780±1.57 63.203±20.61 2.341±1.20 4.547±0.92 16.248±14.84 7.737±0.81 1.528±0.40 8.247±1.71 29.791±14.66 3.281±1.32
ENSMUST00000110315 N/A N/A N/A N/A 3.446±0.00 N/A N/A N/A 9.377±0.00 N/A N/A N/A N/A 2.569±0.32
ENSMUST00000140907 N/A 5.931±2.19 N/A N/A N/A 22.432±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141285 3.732±0.75 1.777±0.11 4.240±0.22 7.613±0.50 6.364±1.68 38.597±7.58 4.033±0.65 2.353±0.33 6.466±5.96 6.399±0.56 2.624±0.51 6.089±0.96 N/A 1.402±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018Z CIL_00018Z_0002 CGP 2:129129700-129211616

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005315 IEA inorganic phosphate transmembrane transporter activity
GO:0005316 IEA high affinity inorganic phosphate:sodium symporter activity
GO:0005886 IDA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0007165 IEA signal transduction
GO:0016021 IEA integral component of membrane
GO:0035435 IEA phosphate ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010641 slc20a1b solute carrier family 20, member 1b protein_coding Danio_rerio
ENSDARG00000020114 slc20a1a solute carrier family 20, member 1a protein_coding Danio_rerio
ENSG00000144136 SLC20A1 solute carrier family 20 (phosphate transporter), member 1 protein_coding Homo_sapiens

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