C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, alpha 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144668 ITGA9 9606 + 3:37452115-37823514 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264741 ITGA9-001 37452119-37823514 protein_coding
  ENST00000411817 ITGA9-004 37780015-37819390 protein_coding
  ENST00000422441 ITGA9-002 37452115-37629519 protein_coding
  ENST00000461533 ITGA9-003 37683876-37732999 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264741ENST00000422441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264741 7.275±0.00 15.682±0.00 0.572±0.00 0.799±0.13 3.416±0.59 2.763±0.41 6.245±2.60 3.037±0.12 3.179±0.10 2.987±0.32 0.632±0.00 2.666±1.19 3.637±0.85 11.773±9.89
ENST00000422441 N/A N/A N/A N/A 4.333±0.00 N/A N/A N/A 7.848±0.00 N/A N/A 2.339±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VQ CIL_0005VQ_0001 CGP 3:37452115-37984469

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005518 IEA collagen binding
GO:0005886 TAS plasma membrane
GO:0007155 IGI cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007411 TAS axon guidance
GO:0008305 TAS integrin complex
GO:0009925 IEA basal plasma membrane
GO:0016020 IEA membrane
GO:0030198 TAS extracellular matrix organization
GO:0030593 IEA neutrophil chemotaxis
GO:0034679 IEA integrin alpha9-beta1 complex
GO:0042060 IEA wound healing
GO:0043236 IEA laminin binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000039115 Itga9 integrin alpha 9 protein_coding Mus_musculus

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