C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IQ motif and Sec7 domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144711 IQSEC1 9606 - 3:12897220-13073117 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273221 IQSEC1-001 12897220-12967668 protein_coding
  ENST00000473088 IQSEC1-004 12936551-12995126 processed_transcript
  ENST00000474467 IQSEC1-005 12960277-12967460 processed_transcript
  ENST00000613206 IQSEC1-003 12900849-13073117 protein_coding
  ENST00000618604 IQSEC1-002 12900577-12987036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273221ENST00000613206ENST00000618604
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273221 7.676±0.00 0.914±0.00 3.319±0.00 3.060±2.13 1.662±0.89 8.265±7.25 3.874±1.70 3.281±2.30 2.334±1.15 3.515±1.36 4.443±1.15 3.802±0.00 5.205±3.24
ENST00000613206 N/A N/A N/A N/A N/A 0.455±0.00 2.239±0.00 N/A N/A N/A N/A N/A N/A
ENST00000618604 N/A N/A N/A 0.688±0.00 0.376±0.00 N/A N/A 1.605±0.00 N/A 2.731±1.68 5.204±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0001 CGP 3:12897220-13420309

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IBA:IEA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0016020 IDA membrane
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IDA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016551 IQSEC1 IQ motif and Sec7 domain 1 protein_coding Danio_rerio
ENSDARG00000073822 IQ motif and Sec7 domain 1 protein_coding Danio_rerio
ENSMUSG00000034312 Iqsec1 IQ motif and Sec7 domain 1 protein_coding Mus_musculus

Loading