C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IQ motif and Sec7 domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034312 Iqsec1 10090 - 6:90659598-90810123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000101151 Iqsec1-201 90659598-90810123 protein_coding
  ENSMUST00000101153 Iqsec1-202 90659598-90716529 protein_coding
  ENSMUST00000133492 Iqsec1-004 90690662-90736687 processed_transcript
  ENSMUST00000141434 Iqsec1-005 90662812-90667999 processed_transcript
  ENSMUST00000146977 Iqsec1-003 90694599-90757550 processed_transcript
  ENSMUST00000154198 Iqsec1-006 90662628-90668076 processed_transcript
  ENSMUST00000156834 Iqsec1-002 90690532-90764141 protein_coding
  ENSMUST00000189881 Iqsec1-001 90662346-90716529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101151ENSMUST00000101153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101151 4.444±0.00 4.666±1.16 4.191±0.00 14.874±7.70 9.230±4.25 5.499±0.00 4.731±1.00 9.223±2.73 2.386±1.49 7.596±3.27 N/A 7.071±0.82 2.869±0.00 3.990±1.63
ENSMUST00000101153 9.239±2.14 9.232±1.85 2.472±0.00 1.942±0.00 11.240±2.64 6.512±1.20 4.357±0.35 12.085±0.11 2.970±1.52 15.957±1.76 2.104±0.29 7.164±1.49 3.624±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0002 CGP 6:90659598-91116829

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005634 IBA nucleus
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016551 IQSEC1 IQ motif and Sec7 domain 1 protein_coding Danio_rerio
ENSDARG00000073822 IQ motif and Sec7 domain 1 protein_coding Danio_rerio
ENSG00000144711 IQSEC1 IQ motif and Sec7 domain 1 protein_coding Homo_sapiens

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