C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273221 IQSEC1-001 ENSG00000144711 9606 - 3:12897220-12967668 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273221
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273221 7.676±0.00 0.914±0.00 3.319±0.00 3.060±2.13 1.662±0.89 8.265±7.25 3.874±1.70 3.281±2.30 2.334±1.15 3.515±1.36 4.443±1.15 3.802±0.00 5.205±3.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0001 CGP 3:12897220-13420309

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA:IEA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0016020 IDA membrane
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IDA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101153 Iqsec1-202 protein_coding Mus_musculus 0 3600
ENSMUST00000189881 Iqsec1-001 protein_coding Mus_musculus 0 3509
ENSMUST00000101151 Iqsec1-201 protein_coding Mus_musculus 0 3369
ENSMUST00000156834 Iqsec1-002 protein_coding Mus_musculus 0 726
ENSMUST00000133492 Iqsec1-004 processed_transcript Mus_musculus 0 579
ENSMUST00000154198 Iqsec1-006 processed_transcript Mus_musculus 0 337
ENSMUST00000146977 Iqsec1-003 processed_transcript Mus_musculus 0 300
ENSMUST00000141434 Iqsec1-005 processed_transcript Mus_musculus 6e-27 128

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