C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like modifier activating enzyme 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144744 UBA3 9606 - 3:69054730-69080408 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349511 UBA3-002 69054730-69080408 protein_coding
  ENST00000361055 UBA3-001 69054730-69080408 protein_coding
  ENST00000415609 UBA3-006 69054730-69080381 protein_coding
  ENST00000461522 UBA3-009 69061583-69064091 retained_intron
  ENST00000461934 UBA3-007 69055298-69080377 nonsense_mediated_decay
  ENST00000464605 UBA3-011 69079744-69080354 retained_intron
  ENST00000465108 UBA3-003 69071093-69080368 retained_intron
  ENST00000465627 UBA3-010 69055298-69080377 nonsense_mediated_decay
  ENST00000466763 UBA3-004 69075084-69080365 retained_intron
  ENST00000485424 UBA3-008 69077339-69080363 retained_intron
  ENST00000493957 UBA3-005 69075083-69080365 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349511ENST00000361055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349511 N/A N/A 4.157±0.00 7.621±0.00 8.775±0.00 8.261±0.00 4.267±0.00 N/A 6.202±0.00 N/A N/A 8.892±0.00 10.509±1.73 N/A
ENST00000361055 11.092±0.00 18.514±0.00 N/A 12.792±1.71 14.412±0.00 11.479±0.00 12.904±6.06 12.281±5.89 N/A 10.353±1.97 4.862±1.27 9.623±1.50 10.627±3.78 15.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TD CIL_0001TD_0002 CGP 3:69019827-69080408
CIL_00034O CIL_00034O_0001 CGP 3:69054730-69106066

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005829 IBA cytosol
GO:0006464 TAS:IEA cellular protein modification process
GO:0006508 TAS proteolysis
GO:0007113 IEA endomitotic cell cycle
GO:0008152 IEA metabolic process
GO:0008641 IEA small protein activating enzyme activity
GO:0016881 IEA acid-amino acid ligase activity
GO:0019781 IBA NEDD8 activating enzyme activity
GO:0045116 IBA:IEA protein neddylation
GO:0046982 IPI protein heterodimerization activity
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057987 uba3 ubiquitin-like modifier activating enzyme 3 protein_coding Danio_rerio
ENSMUSG00000030061 Uba3 ubiquitin-like modifier activating enzyme 3 protein_coding Mus_musculus

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