C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057997-ENSDARG00000057987 CGP 7955 11:18256871-18302666
GeneTranscriptPositionBiotype
ENSDARG00000057987 (uba3)
ubiquitin-like modifier activating enzyme 3 		ENSDART00000080752 (uba3-001) 18284711-18302600 protein_coding
ENSDART00000153801 (uba3-002) 18292905-18302666 protein_coding
ENSDART00000156400 (uba3-003) 18296138-18302580 retained_intron
ENSDARG00000057997 (tmf1)
TATA element modulatory factor 1 		ENSDART00000080770 (tmf1-001) 18256871-18282459 protein_coding
CIL_0001TD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144747-ENSG00000144744 CGP 9606 3:69019827-69080408
GeneTranscriptPositionBiotype
ENSG00000144744 (UBA3)
ubiquitin-like modifier activating enzyme 3 		ENST00000349511 (UBA3-002) 69054730-69080408 protein_coding
ENST00000361055 (UBA3-001) 69054730-69080408 protein_coding
ENST00000415609 (UBA3-006) 69054730-69080381 protein_coding
ENST00000461522 (UBA3-009) 69061583-69064091 retained_intron
ENST00000461934 (UBA3-007) 69055298-69080377 nonsense_mediated_decay
ENST00000464605 (UBA3-011) 69079744-69080354 retained_intron
ENST00000465108 (UBA3-003) 69071093-69080368 retained_intron
ENST00000465627 (UBA3-010) 69055298-69080377 nonsense_mediated_decay
ENST00000466763 (UBA3-004) 69075084-69080365 retained_intron
ENST00000485424 (UBA3-008) 69077339-69080363 retained_intron
ENST00000493957 (UBA3-005) 69075083-69080365 retained_intron
ENSG00000144747 (TMF1)
TATA element modulatory factor 1 		ENST00000398559 (TMF1-001) 69019827-69052303 protein_coding
ENST00000477872 (TMF1-004) 69043792-69044628 retained_intron
ENST00000488010 (TMF1-002) 69023077-69052290 nonsense_mediated_decay
ENST00000489370 (TMF1-005) 69024282-69026100 processed_transcript
ENST00000543976 (TMF1-201) 69023177-69052086 protein_coding
ENSG00000265355 (MIR3136)
microRNA 3136 		ENST00000583498 (MIR3136-201) 69048958-69049035 miRNA
CIL_0001TD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030059-ENSMUSG00000030061 CGP 10090 6:97155266-97205642
GeneTranscriptPositionBiotype
ENSMUSG00000030059 (Tmf1)
TATA element modulatory factor 1 		ENSMUST00000095664 (Tmf1-001) 97155266-97179124 protein_coding
ENSMUST00000124173 (Tmf1-002) 97155266-97179037 nonsense_mediated_decay
ENSMUSG00000030061 (Uba3)
ubiquitin-like modifier activating enzyme 3 		ENSMUST00000089287 (Uba3-201) 97183816-97205642 protein_coding
ENSMUST00000164744 (Uba3-202) 97183670-97205560 protein_coding
ENSMUSG00000065728 (Gm26175)
predicted gene, 26175 		ENSMUST00000083794 (Gm26175-201) 97162817-97162947 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TD_0001ENSDARG00000057987ENSDART00000080752ENSDART00000153801ENSDART00000156400ENSDARG00000057997ENSDART00000080770CIL_0001TD_0002ENSG00000144744ENST00000349511ENST00000361055ENST00000415609ENST00000461522ENST00000461934ENST00000464605ENST00000465108ENST00000465627ENST00000466763ENST00000485424ENST00000493957ENSG00000144747ENST00000398559ENST00000477872ENST00000488010ENST00000489370ENST00000543976ENSG00000265355ENST00000583498CIL_0001TD_0003ENSMUSG00000030059ENSMUST00000095664ENSMUST00000124173ENSMUSG00000030061ENSMUST00000089287ENSMUST00000164744ENSMUSG00000065728ENSMUST00000083794
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TD_0001ENSDARG00000057987ENSDART00000080752ENSDART00000153801ENSDARG00000057997ENSDART00000080770CIL_0001TD_0002ENSG00000144744ENST00000349511ENST00000361055ENSG00000144747ENST00000398559ENST00000488010ENST00000543976ENSG00000265355ENST00000583498CIL_0001TD_0003ENSMUSG00000030059ENSMUST00000095664ENSMUST00000124173ENSMUSG00000030061ENSMUST00000089287ENSMUST00000164744ENSMUSG00000065728ENSMUST00000083794
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057987 ENSDART00000080752 N/A N/A N/A 10.222±4.85 N/A N/A 9.442±2.96 15.237±4.30 2.015±0.00 N/A 4.616±0.00 N/A N/A N/A
ENSDART00000153801 N/A N/A N/A 13.234±0.00 N/A N/A 8.184±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057997 ENSDART00000080770 N/A N/A N/A 9.051±0.43 N/A N/A 7.162±2.03 7.027±0.00 1.805±0.00 N/A 3.575±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144744 ENST00000349511 N/A N/A 4.157±0.00 7.621±0.00 8.775±0.00 8.261±0.00 4.267±0.00 N/A 6.202±0.00 N/A N/A 8.892±0.00 10.509±1.73 N/A
ENST00000361055 11.092±0.00 18.514±0.00 N/A 12.792±1.71 14.412±0.00 11.479±0.00 12.904±6.06 12.281±5.89 N/A 10.353±1.97 4.862±1.27 9.623±1.50 10.627±3.78 15.394±0.00
ENST00000415609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144747 ENST00000398559 4.041±0.00 4.851±0.00 1.188±0.00 2.149±0.11 2.842±0.70 2.711±0.31 1.745±0.84 5.470±0.00 2.164±0.51 3.703±0.77 3.813±0.00 2.584±0.63 2.495±0.53 4.238±0.00
ENST00000477872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488010 N/A N/A 3.865±0.00 N/A N/A 5.770±0.00 N/A 3.505±0.00 N/A 3.295±0.00 N/A 2.616±0.00 N/A 8.094±0.00
ENST00000489370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543976 N/A N/A N/A 4.091±0.00 3.437±0.00 5.251±0.00 1.730±0.00 N/A 3.508±0.00 5.442±0.00 3.709±2.86 4.751±0.44 10.377±0.00 37.903±25.94
ENSG00000265355 ENST00000583498 N/A 0.328±0.00 N/A N/A N/A N/A N/A N/A 0.298±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030059 ENSMUST00000095664 2.029±1.35 2.360±0.24 2.895±0.85 7.625±3.90 2.216±0.48 4.096±1.01 1.686±0.54 2.744±0.46 1.430±0.41 3.367±0.42 3.792±0.39 4.242±2.95 9.657±3.35 30.417±6.64
ENSMUST00000124173 N/A N/A N/A 8.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.508±4.59 61.846±0.00
ENSMUSG00000030061 ENSMUST00000089287 3.548±0.63 1.611±0.80 14.315±3.33 14.559±1.92 5.608±4.84 1.614±0.61 6.697±2.53 3.138±1.59 6.538±3.61 3.021±0.91 9.014±2.54 7.056±7.67 22.127±5.77 3.539±0.96
ENSMUST00000164744 11.735±4.18 4.299±0.71 4.196±0.00 7.857±5.59 7.186±1.23 3.893±1.50 8.157±1.27 6.398±0.95 2.738±1.08 8.022±1.20 N/A 6.553±1.62 3.553±0.00 2.933±0.88
ENSMUSG00000065728 ENSMUST00000083794 N/A N/A N/A 32.412±0.00 N/A N/A N/A N/A 4.918±0.00 N/A 5.733±0.00 29.881±10.31 59.031±48.00 N/A

Loading