C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like modifier activating enzyme 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361055 UBA3-001 ENSG00000144744 9606 - 3:69054730-69080408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000361055
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000361055 11.092±0.00 18.514±0.00 12.792±1.71 14.412±0.00 11.479±0.00 12.904±6.06 12.281±5.89 10.353±1.97 4.862±1.27 9.623±1.50 10.627±3.78 15.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TD CIL_0001TD_0002 CGP 3:69019827-69080408
CIL_00034O CIL_00034O_0001 CGP 3:69054730-69106066

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005829 IBA cytosol
GO:0006464 TAS:IEA cellular protein modification process
GO:0006508 TAS proteolysis
GO:0007113 IEA endomitotic cell cycle
GO:0008641 IEA small protein activating enzyme activity
GO:0016881 IEA acid-amino acid ligase activity
GO:0019781 IBA NEDD8 activating enzyme activity
GO:0045116 IBA:IEA protein neddylation
GO:0046982 IPI protein heterodimerization activity
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089287 Uba3-201 protein_coding Mus_musculus 0 2056
ENSMUST00000164744 Uba3-202 protein_coding Mus_musculus 0 1901
ENSMUST00000122019 Gm14538-001 processed_pseudogene Mus_musculus 0 1620
ENSMUST00000165161 Gm17213-001 processed_pseudogene Mus_musculus 0 850
ENSDART00000080752 uba3-001 protein_coding Danio_rerio 0 743
ENSDART00000156400 uba3-003 retained_intron Danio_rerio 0 259

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