C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM domain containing preferred translocation partner in lipoma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145012 LPP 9606 + 3:188153284-188890671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414139 LPP-006 188153931-188484677 protein_coding
  ENST00000415906 LPP-019 188609221-188746624 protein_coding
  ENST00000416784 LPP-004 188153872-188609184 protein_coding
  ENST00000420410 LPP-009 188212641-188524693 protein_coding
  ENST00000426274 LPP-008 188208198-188484597 protein_coding
  ENST00000430340 LPP-005 188153875-188406278 protein_coding
  ENST00000443217 LPP-011 188212704-188406260 protein_coding
  ENST00000448637 LPP-002 188153284-188712842 protein_coding
  ENST00000454789 LPP-007 188153942-188484595 protein_coding
  ENST00000457242 LPP-012 188239864-188406291 protein_coding
  ENST00000459897 LPP-017 188758739-188866309 processed_transcript
  ENST00000462758 LPP-014 188568150-188609551 processed_transcript
  ENST00000471917 LPP-016 188569031-188760201 processed_transcript
  ENST00000474472 LPP-013 188472573-188524787 processed_transcript
  ENST00000483938 LPP-020 188725268-188746618 processed_transcript
  ENST00000484468 LPP-018 188484590-188554101 processed_transcript
  ENST00000487347 LPP-015 188584347-188609606 processed_transcript
  ENST00000494044 LPP-021 188743647-188746614 processed_transcript
  ENST00000494233 LPP-010 188341663-188609279 processed_transcript
  ENST00000616304 LPP-201 188212933-188890671 protein_coding
  ENST00000617246 LPP-202 188225405-188890671 protein_coding
  ENST00000618621 LPP-001 188212933-188890671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000616304ENST00000617246
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000616304 N/A N/A N/A N/A N/A N/A N/A N/A 1.129±0.00 N/A N/A N/A
ENST00000617246 10.757±0.00 4.998±0.00 0.761±0.04 4.322±2.59 6.663±0.00 2.741±0.00 84.366±0.00 2.756±0.00 N/A 4.000±2.61 4.587±0.00 5.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y6 CIL_0003Y6_0002 CGP 3:187721377-188890671
CIL_00003W CIL_00003W_0001 CGP 3:188153284-189325304

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 IEA cell adhesion
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023578 lpp LIM domain containing preferred translocation partner in lipoma protein_coding Danio_rerio
ENSMUSG00000033306 Lpp LIM domain containing preferred translocation partner in lipoma protein_coding Mus_musculus

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