C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM domain containing preferred translocation partner in lipoma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033306 Lpp 10090 + 16:24393350-24992576 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038053 Lpp-201 24393350-24992576 protein_coding
  ENSMUST00000078988 Lpp-202 24448091-24992576 protein_coding
  ENSMUST00000115314 Lpp-203 24721855-24992576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038053ENSMUST00000078988ENSMUST00000115314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038053 4.571±1.18 7.776±2.31 N/A 0.692±0.42 5.480±2.75 3.102±0.95 3.217±0.29 6.404±1.57 1.296±1.23 4.945±1.65 1.091±0.15 4.022±2.06 1.835±1.12 N/A
ENSMUST00000078988 8.843±7.38 N/A 30.874±11.15 0.313±0.06 3.955±0.00 7.797±2.68 N/A 2.195±1.26 1.118±1.02 2.982±1.39 N/A 11.293±4.34 3.582±1.54 N/A
ENSMUST00000115314 N/A N/A 38.076±11.59 0.090±0.00 N/A N/A N/A N/A 0.851±0.07 N/A 0.409±0.00 5.068±1.08 2.306±0.73 2.725±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y6 CIL_0003Y6_0003 CGP 16:23965052-24992576
CIL_00003W CIL_00003W_0002 CGP 16:24393350-25422344

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0007155 IEA cell adhesion
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023578 lpp LIM domain containing preferred translocation partner in lipoma protein_coding Danio_rerio
ENSG00000145012 LPP LIM domain containing preferred translocation partner in lipoma protein_coding Homo_sapiens

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