C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM domain containing preferred translocation partner in lipoma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616304 LPP-201 ENSG00000145012 9606 + 3:188212933-188890671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000616304
Transcript ID Muscle
ENST00000616304 1.129±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y6 CIL_0003Y6_0002 CGP 3:187721377-188890671
CIL_00003W CIL_00003W_0001 CGP 3:188153284-189325304

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 IEA cell adhesion
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038053 Lpp-201 protein_coding Mus_musculus 0 2231
ENSMUST00000078988 Lpp-202 protein_coding Mus_musculus 0 2231
ENSMUST00000115314 Lpp-203 protein_coding Mus_musculus 0 1775
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 66

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