C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: placenta-specific 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145287 PLAC8 9606 - 4:83090048-83137075 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311507 PLAC8-001 83090048-83114802 protein_coding
  ENST00000411416 PLAC8-005 83090688-83109843 protein_coding
  ENST00000426923 PLAC8-004 83092861-83114715 protein_coding
  ENST00000505406 PLAC8-006 83090806-83137075 protein_coding
  ENST00000509973 PLAC8-003 83090793-83114736 protein_coding
  ENST00000515389 PLAC8-002 83090793-83114736 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311507ENST00000411416ENST00000426923ENST00000505406ENST00000509973ENST00000515389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311507 0.566±0.00 N/A 0.157±0.00 N/A 0.110±0.00 9.256±0.00 0.054±0.00 0.688±0.62 0.678±0.00 N/A N/A 1.226±0.00 2.279±0.00 0.169±0.00
ENST00000411416 1.084±0.00 N/A 0.479±0.00 0.144±0.00 N/A 3.422±0.00 N/A 0.152±0.00 1.165±1.02 21.511±0.00 N/A 2.459±0.93 26.978±24.80 0.301±0.00
ENST00000426923 N/A 1.585±0.00 N/A 0.076±0.00 0.500±0.32 N/A 0.021±0.00 0.016±0.00 0.086±0.00 N/A 0.026±0.00 0.156±0.00 N/A 0.044±0.02
ENST00000505406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00
ENST00000509973 1.832±0.00 9.773±0.00 N/A 0.212±0.00 N/A 2.057±0.00 N/A 5.363±0.00 1.524±0.34 12.632±0.00 0.204±0.00 1.322±0.14 5.175±0.00 0.172±0.00
ENST00000515389 N/A N/A N/A 0.431±0.00 N/A N/A N/A 0.369±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052V CIL_00052V_0002 CGP 4:83034447-83137075
CIL_0007IV CIL_0007IV_0001 CGP 4:83090048-83284914

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0009409 IEA response to cold
GO:0040015 IEA negative regulation of multicellular organism growth
GO:0042742 IEA defense response to bacterium
GO:0043066 IEA negative regulation of apoptotic process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0050873 IEA brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043729 plac8.1 placenta-specific 8, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000094438 plac8.2 placenta-specific 8, tandem duplicate 2 protein_coding Danio_rerio
ENSMUSG00000029322 Plac8 placenta-specific 8 protein_coding Mus_musculus

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