C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: placenta-specific 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029322 Plac8 10090 - 5:100553725-100572245 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031264 Plac8-001 100553725-100572245 protein_coding
  ENSMUST00000097437 Plac8-004 100553726-100562858 protein_coding
  ENSMUST00000112910 Plac8-003 100553727-100563423 protein_coding
  ENSMUST00000144595 Plac8-002 100562438-100572192 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031264ENSMUST00000097437ENSMUST00000112910ENSMUST00000144595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031264 136.628±125.67 4.581±0.58 33.114±0.26 0.650±0.07 57.171±18.21 442.899±90.16 2.231±1.21 24.866±6.39 50.092±41.67 41.886±5.65 0.905±0.95 39.704±8.52 465.892±214.30 N/A
ENSMUST00000097437 N/A N/A N/A 0.134±0.00 N/A N/A 0.382±0.00 N/A N/A N/A 0.192±0.00 N/A N/A 4.231±0.61
ENSMUST00000112910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.035±3.30
ENSMUST00000144595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.08 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052V CIL_00052V_0003 CGP 5:100518309-100572245
CIL_0007IV CIL_0007IV_0002 CGP 5:100553725-100675140

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0008284 IDA positive regulation of cell proliferation
GO:0009409 IMP response to cold
GO:0040015 IMP negative regulation of multicellular organism growth
GO:0042742 IMP defense response to bacterium
GO:0043066 IDA negative regulation of apoptotic process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0050873 IMP brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043729 plac8.1 placenta-specific 8, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000094438 plac8.2 placenta-specific 8, tandem duplicate 2 protein_coding Danio_rerio
ENSG00000145287 PLAC8 placenta-specific 8 protein_coding Homo_sapiens

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