C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00052V_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000043732-ENSDARG00000094438 | CGP | 7955 | 10:11321780-11342387  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000043732  (cops4)COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) |
ENSDART00000064215 (cops4-001)
|
11321780-11334372 | protein_coding | |
|
ENSDARG00000094438 (plac8.2) placenta-specific 8, tandem duplicate 2 |
ENSDART00000145346 (plac8.2-001)
|
11337857-11342387 | protein_coding | |
| CIL_00052V_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000138663-ENSG00000145287 | CGP | 9606 | 4:83034447-83137075 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000138663 (COPS4) COP9 signalosome subunit 4 |
ENST00000264389 (COPS4-001)
|
83035090-83075818 | protein_coding | |
|
ENST00000503682 (COPS4-003)
|
83035207-83075797 | protein_coding | ||
|
ENST00000504274 (COPS4-009)
|
83062975-83068506 | retained_intron | ||
|
ENST00000506443 (COPS4-006)
|
83035199-83057062 | processed_transcript | ||
|
ENST00000507376 (COPS4-007)
|
83035201-83049959 | nonsense_mediated_decay | ||
|
ENST00000509093 (COPS4-002)
|
83034447-83075789 | protein_coding | ||
|
ENST00000509317 (COPS4-011)
|
83035173-83075371 | protein_coding | ||
|
ENST00000510801 (COPS4-010)
|
83035174-83049984 | processed_transcript | ||
|
ENST00000511653 (COPS4-004)
|
83035225-83075756 | protein_coding | ||
|
ENST00000511708 (COPS4-008)
|
83035430-83049307 | processed_transcript | ||
|
ENST00000511891 (COPS4-005)
|
83035171-83049515 | retained_intron | ||
|
ENSG00000145287 (PLAC8) placenta-specific 8 |
ENST00000311507 (PLAC8-001)
|
83090048-83114802 | protein_coding | |
|
ENST00000411416 (PLAC8-005)
|
83090688-83109843 | protein_coding | ||
|
ENST00000426923 (PLAC8-004)
|
83092861-83114715 | protein_coding | ||
|
ENST00000505406 (PLAC8-006)
|
83090806-83137075 | protein_coding | ||
|
ENST00000509973 (PLAC8-003)
|
83090793-83114736 | protein_coding | ||
|
ENST00000515389 (PLAC8-002)
|
83090793-83114736 | processed_transcript | ||
| CIL_00052V_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000035297-ENSMUSG00000029322 | CGP | 10090 | 5:100518309-100572245 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029322 (Plac8) placenta-specific 8 |
ENSMUST00000031264 (Plac8-001)
|
100553725-100572245 | protein_coding | |
|
ENSMUST00000097437 (Plac8-004)
|
100553726-100562858 | protein_coding | ||
|
ENSMUST00000112910 (Plac8-003)
|
100553727-100563423 | protein_coding | ||
|
ENSMUST00000144595 (Plac8-002)
|
100562438-100572192 | retained_intron | ||
|
ENSMUSG00000035297 (Cops4) COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) |
ENSMUST00000045993 (Cops4-001)
|
100518309-100547803 | protein_coding | |
|
ENSMUST00000123069 (Cops4-004)
|
100518472-100533391 | nonsense_mediated_decay | ||
|
ENSMUST00000123492 (Cops4-007)
|
100528640-100543923 | nonsense_mediated_decay | ||
|
ENSMUST00000123559 (Cops4-003)
|
100532242-100547780 | retained_intron | ||
|
ENSMUST00000146476 (Cops4-005)
|
100518737-100537354 | protein_coding | ||
|
ENSMUST00000147729 (Cops4-002)
|
100518443-100532095 | retained_intron | ||
|
ENSMUST00000151414 (Cops4-006)
|
100518457-100537468 | protein_coding | ||
Expression Patterns
|
