C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GDNF family receptor alpha 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146013 GFRA3 9606 - 5:138252379-138274671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274721 GFRA3-001 138252379-138274671 protein_coding
  ENST00000378362 GFRA3-002 138252382-138274565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274721ENST00000378362
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274721 0.505±0.00 0.228±0.00 N/A 2.551±0.00 0.350±0.17 N/A 0.079±0.00 0.337±0.10 N/A 1.118±0.51 N/A 5.005±0.00
ENST00000378362 N/A 0.038±0.00 0.190±0.12 N/A 0.478±0.00 0.222±0.00 N/A N/A 0.348±0.00 0.484±0.00 0.034±0.00 0.949±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D9 CIL_0005D9_0001 CGP 5:138187648-138274671
CIL_0005D8 CIL_0005D8_0001 CGP 5:138252379-138338355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0005102 TAS receptor binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007165 TAS signal transduction
GO:0007399 TAS nervous system development
GO:0007411 IEA axon guidance
GO:0007422 TAS peripheral nervous system development
GO:0008046 IEA axon guidance receptor activity
GO:0009897 IEA external side of plasma membrane
GO:0019898 TAS extrinsic component of membrane
GO:0031225 IEA anchored component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048485 IEA sympathetic nervous system development
GO:0048666 IEA neuron development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087704 gfra3 GDNF family receptor alpha 3 protein_coding Danio_rerio
ENSMUSG00000024366 Gfra3 glial cell line derived neurotrophic factor family receptor alpha 3 protein_coding Mus_musculus

Loading