C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3-domain kinase binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147010 SH3KBP1 9606 - X:19533975-19887601 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379697 SH3KBP1-002 19588278-19887459 protein_coding
  ENST00000379698 SH3KBP1-003 19535693-19799751 protein_coding
  ENST00000379716 SH3KBP1-008 19534007-19670998 protein_coding
  ENST00000379726 SH3KBP1-004 19536414-19746411 protein_coding
  ENST00000397821 SH3KBP1-001 19533975-19887601 protein_coding
  ENST00000431164 SH3KBP1-006 19683824-19740837 protein_coding
  ENST00000432234 SH3KBP1-005 19645417-19747703 protein_coding
  ENST00000477102 SH3KBP1-007 19592068-19664715 processed_transcript
  ENST00000494961 SH3KBP1-009 19588684-19695701 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379697ENST00000379698ENST00000379716ENST00000379726ENST00000397821ENST00000432234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379697 N/A N/A 0.585±0.00 2.514±0.00 N/A N/A N/A N/A 1.732±0.00 N/A N/A 0.585±0.00 N/A N/A
ENST00000379698 13.678±0.00 14.147±0.00 0.936±0.00 6.563±0.00 8.153±7.35 5.182±0.00 N/A 3.695±0.00 1.522±0.81 1.830±0.00 0.918±0.60 4.135±0.82 7.403±0.00 4.249±3.56
ENST00000379716 N/A N/A 0.511±0.00 3.154±0.00 0.429±0.00 N/A N/A N/A N/A N/A 0.517±0.00 5.032±0.00 N/A N/A
ENST00000379726 6.841±0.00 N/A N/A 4.899±1.91 1.587±0.00 2.272±0.42 N/A N/A N/A N/A N/A 16.167±0.00 23.989±0.00 3.466±0.00
ENST00000397821 4.997±0.00 4.790±0.00 N/A N/A 6.596±0.00 2.034±0.15 1.777±1.23 1.297±0.20 0.849±0.14 1.608±1.14 0.519±0.00 1.653±0.56 3.960±1.01 2.121±0.82
ENST00000432234 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.533±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0005911 IEA cell-cell junction
GO:0006897 IEA endocytosis
GO:0006915 IEA apoptotic process
GO:0007010 IMP cytoskeleton organization
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007267 NAS cell-cell signaling
GO:0008360 IMP regulation of cell shape
GO:0016477 IMP cell migration
GO:0017124 IEA SH3 domain binding
GO:0031410 IEA cytoplasmic vesicle
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075853 sh3kbp1 SH3-domain kinase binding protein 1 protein_coding Danio_rerio
ENSMUSG00000040990 Sh3kbp1 SH3-domain kinase binding protein 1 protein_coding Mus_musculus

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