C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain kinase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397821 SH3KBP1-001 ENSG00000147010 9606 - X:19533975-19887601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397821
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397821 4.997±0.00 4.790±0.00 6.596±0.00 2.034±0.15 1.777±1.23 1.297±0.20 0.849±0.14 1.608±1.14 0.519±0.00 1.653±0.56 3.960±1.01 2.121±0.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0005911 IEA cell-cell junction
GO:0006897 IEA endocytosis
GO:0006915 IEA apoptotic process
GO:0007010 IMP cytoskeleton organization
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007267 NAS cell-cell signaling
GO:0008360 IMP regulation of cell shape
GO:0016477 IMP cell migration
GO:0017124 IEA SH3 domain binding
GO:0031410 IEA cytoplasmic vesicle
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112456 Sh3kbp1-001 protein_coding Mus_musculus 0 4109
ENSMUST00000080394 Sh3kbp1-002 protein_coding Mus_musculus 0 3465
ENSMUST00000112451 Sh3kbp1-007 protein_coding Mus_musculus 0 2750
ENSMUST00000112447 Sh3kbp1-006 processed_transcript Mus_musculus 0 2745
ENSMUST00000112453 Sh3kbp1-008 protein_coding Mus_musculus 0 2691
ENSMUST00000128185 Sh3kbp1-009 processed_transcript Mus_musculus 0 1947
ENSMUST00000073094 Sh3kbp1-004 protein_coding Mus_musculus 0 1923
ENSMUST00000142426 Sh3kbp1-010 processed_transcript Mus_musculus 0 1892
ENSMUST00000141354 Sh3kbp1-003 nonsense_mediated_decay Mus_musculus 0 1683
ENSMUST00000150433 Sh3kbp1-005 retained_intron Mus_musculus 0 1086
ENSMUST00000123433 Sh3kbp1-012 protein_coding Mus_musculus 0 867
ENSMUST00000134062 Sh3kbp1-011 processed_transcript Mus_musculus 0 728
ENSMUST00000152426 Sh3kbp1-013 protein_coding Mus_musculus 0 560
ENSMUST00000130987 Sh3kbp1-014 processed_transcript Mus_musculus 0 411

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