C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain kinase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379726 SH3KBP1-004 ENSG00000147010 9606 - X:19536414-19746411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonOvaryPlacentaTestisENST00000379726
Transcript ID Adipose Brain Breast Colon Ovary Placenta Testis
ENST00000379726 6.841±0.00 4.899±1.91 1.587±0.00 2.272±0.42 16.167±0.00 23.989±0.00 3.466±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073094 Sh3kbp1-004 protein_coding Mus_musculus 0 2599
ENSMUST00000080394 Sh3kbp1-002 protein_coding Mus_musculus 0 1923
ENSMUST00000112456 Sh3kbp1-001 protein_coding Mus_musculus 0 1923
ENSMUST00000150433 Sh3kbp1-005 retained_intron Mus_musculus 0 1762
ENSMUST00000112451 Sh3kbp1-007 protein_coding Mus_musculus 0 1648
ENSMUST00000112453 Sh3kbp1-008 protein_coding Mus_musculus 0 1642
ENSMUST00000112447 Sh3kbp1-006 processed_transcript Mus_musculus 0 1642
ENSMUST00000141354 Sh3kbp1-003 nonsense_mediated_decay Mus_musculus 0 1190
ENSMUST00000128185 Sh3kbp1-009 processed_transcript Mus_musculus 0 845
ENSMUST00000142426 Sh3kbp1-010 processed_transcript Mus_musculus 0 843
ENSMUST00000134062 Sh3kbp1-011 processed_transcript Mus_musculus 0 728
ENSMUST00000123433 Sh3kbp1-012 protein_coding Mus_musculus 0 459
ENSMUST00000130987 Sh3kbp1-014 processed_transcript Mus_musculus 0 399
ENSMUST00000152426 Sh3kbp1-013 protein_coding Mus_musculus 0 399

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