C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147403 RPL10 9606 + X:154389955-154409168 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344746 RPL10-001 154398372-154402339 protein_coding
  ENST00000369817 RPL10-008 154397154-154400917 protein_coding
  ENST00000406022 RPL10-011 154398890-154400909 protein_coding
  ENST00000424325 RPL10-201 154398230-154402339 protein_coding
  ENST00000427682 RPL10-018 154399883-154403497 protein_coding
  ENST00000428169 RPL10-020 154399883-154409168 protein_coding
  ENST00000436473 RPL10-015 154398367-154400811 protein_coding
  ENST00000449494 RPL10-019 154399883-154403490 protein_coding
  ENST00000451365 RPL10-017 154399366-154403697 protein_coding
  ENST00000458500 RPL10-009 154398378-154400917 protein_coding
  ENST00000467168 RPL10-012 154398497-154400913 retained_intron
  ENST00000474786 RPL10-004 154389955-154400166 retained_intron
  ENST00000479366 RPL10-016 154397749-154398619 processed_transcript
  ENST00000482732 RPL10-003 154398388-154400913 retained_intron
  ENST00000485196 RPL10-010 154398379-154400817 retained_intron
  ENST00000489200 RPL10-006 154398377-154400898 retained_intron
  ENST00000491035 RPL10-005 154398377-154400913 retained_intron
  ENST00000492572 RPL10-013 154398496-154400897 retained_intron
  ENST00000618723 RPL10-202 154398230-154402339 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000406022ENST00000436473ENST00000458500ENST00000467168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000406022 135.981±0.00 378.201±0.00 16.270±0.00 72.579±35.57 118.183±67.58 219.932±188.01 36.117±25.56 150.643±110.81 67.698±22.38 142.158±81.63 68.459±0.00 640.854±587.23 674.302±355.49 105.169±83.54
ENST00000436473 189.187±0.00 N/A 27.413±0.00 N/A 85.328±18.92 117.698±30.08 113.932±93.32 87.562±41.85 142.792±98.27 479.312±418.65 314.129±218.81 995.566±917.67 1050.527±274.91 48.010±17.61
ENST00000458500 320.391±0.00 483.662±0.00 N/A 68.606±0.00 218.524±0.00 284.918±0.00 67.933±56.50 146.106±0.00 73.069±47.61 546.815±0.00 406.320±0.00 367.655±257.48 292.416±93.91 121.490±0.00
ENST00000467168 N/A N/A N/A 20.791±0.00 N/A N/A N/A 18.080±0.00 N/A N/A N/A 123.849±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025581 rpl10 ribosomal protein L10 protein_coding Danio_rerio

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