C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436473 RPL10-015 ENSG00000147403 9606 + X:154398367-154400811 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436473
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436473 189.187±0.00 27.413±0.00 85.328±18.92 117.698±30.08 113.932±93.32 87.562±41.85 142.792±98.27 479.312±418.65 314.129±218.81 995.566±917.67 1050.527±274.91 48.010±17.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 824
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 811
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 811
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 811
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 802
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 758
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 673
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 636
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 614
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 542
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 520
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 435
ENSMUST00000121144 Gm11450-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000138954 Rpl10-006 retained_intron Mus_musculus 0 300
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0 278
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 254

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