C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntrophin, gamma 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147481 SNTG1 9606 + 8:49909789-50794118 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276467 SNTG1-201 50394198-50794118 protein_coding
  ENST00000517473 SNTG1-003 49912037-50792867 protein_coding
  ENST00000518864 SNTG1-002 49909789-50792829 protein_coding
  ENST00000520697 SNTG1-007 49910949-50163969 processed_transcript
  ENST00000520825 SNTG1-004 50172561-50792861 nonsense_mediated_decay
  ENST00000521316 SNTG1-006 49912176-50286853 processed_transcript
  ENST00000521574 SNTG1-005 49909804-49911583 processed_transcript
  ENST00000522124 SNTG1-001 49911673-50794118 protein_coding
  ENST00000523085 SNTG1-008 49912145-50449725 protein_coding
  ENST00000524004 SNTG1-009 50553050-50709183 nonsense_mediated_decay
  ENST00000620202 SNTG1-202 50394198-50794118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000276467ENST00000517473ENST00000520697ENST00000520825ENST00000521574ENST00000522124ENST00000523085ENST00000524004ENST00000620202
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000276467 N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A
ENST00000517473 N/A N/A 0.027±0.00 2.236±1.03 N/A N/A N/A N/A N/A N/A N/A
ENST00000520697 0.214±0.00 0.078±0.00 N/A N/A 0.125±0.00 0.141±0.00 0.097±0.00 0.058±0.00 0.257±0.00 0.108±0.00 0.052±0.00
ENST00000520825 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A
ENST00000521574 N/A N/A 1.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522124 N/A N/A N/A 1.821±0.00 N/A 0.003±0.00 N/A N/A N/A N/A N/A
ENST00000523085 N/A N/A N/A N/A N/A 0.131±0.09 N/A 0.056±0.00 0.103±0.00 N/A N/A
ENST00000524004 N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620202 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0007154 TAS cell communication
GO:0008022 IPI protein C-terminus binding
GO:0016013 TAS syntrophin complex
GO:0032587 IDA ruffle membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061832 SNTG1 syntrophin, gamma 1 protein_coding Danio_rerio
ENSMUSG00000025909 Sntg1 syntrophin, gamma 1 protein_coding Mus_musculus

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