C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntrophin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520825 SNTG1-004 ENSG00000147481 9606 + 8:50172561-50792861 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000520825
Transcript ID Kidney
ENST00000520825 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140295 Sntg1-001 protein_coding Mus_musculus 0 1716
ENSMUST00000132064 Sntg1-004 protein_coding Mus_musculus 0 1703
ENSMUST00000115488 Sntg1-201 protein_coding Mus_musculus 0 1692
ENSMUST00000140302 Sntg1-005 nonsense_mediated_decay Mus_musculus 0 909
ENSMUST00000115484 Sntg1-006 protein_coding Mus_musculus 0 697
ENSMUST00000135046 Sntg1-007 protein_coding Mus_musculus 0 340
ENSMUST00000144593 Sntg1-003 nonsense_mediated_decay Mus_musculus 0 311
ENSMUST00000134075 Sntg1-002 retained_intron Mus_musculus 0 193

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