C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: INTS3 and NABP interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148153 INIP 9606 - 9:112683926-112718236 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374234 INIP-003 112687145-112718107 protein_coding
  ENST00000374236 INIP-002 112687117-112718149 protein_coding
  ENST00000374242 INIP-001 112683926-112718236 protein_coding
  ENST00000476599 INIP-006 112694034-112718117 processed_transcript
  ENST00000481146 INIP-004 112687132-112718086 processed_transcript
  ENST00000497712 INIP-005 112687097-112718089 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374234ENST00000374236ENST00000374242ENST00000481146ENST00000497712
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374234 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 N/A N/A N/A
ENST00000374236 N/A N/A N/A N/A 2.047±0.00 N/A N/A N/A 0.996±0.00 0.319±0.00 3.759±0.00 3.201±0.00 4.415±0.00
ENST00000374242 1.129±0.00 1.074±0.00 3.513±2.43 2.130±1.18 1.345±0.64 1.944±0.00 1.682±1.42 1.570±0.00 0.933±0.00 0.308±0.00 3.072±0.20 2.034±0.42 1.622±0.08
ENST00000481146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.834±0.00 N/A N/A
ENST00000497712 N/A 2.681±0.00 N/A N/A N/A N/A N/A N/A 1.340±0.00 N/A N/A 1.651±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022E CIL_00022E_0002 CGP 9:112486847-112718236
CIL_0005X4 CIL_0005X4_0001 CGP 9:112683926-112881671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IMP DNA repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010212 IMP response to ionizing radiation
GO:0070876 IDA SOSS complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028523 inip ints3 and nabp interacting protein protein_coding Danio_rerio
ENSMUSG00000038544 Inip INTS3 and NABP interacting protein protein_coding Mus_musculus

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