C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosome recycling factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148187 MRRF 9606 + 9:122264603-122323464 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297908 MRRF-201 122264603-122323461 protein_coding
  ENST00000344641 MRRF-001 122264656-122323464 protein_coding
  ENST00000373723 MRRF-010 122264895-122323092 protein_coding
  ENST00000373724 MRRF-006 122265462-122285946 processed_transcript
  ENST00000373727 MRRF-005 122264914-122285394 retained_intron
  ENST00000373728 MRRF-003 122264914-122291798 retained_intron
  ENST00000373729 MRRF-004 122264904-122322724 protein_coding
  ENST00000394315 MRRF-202 122270864-122323461 protein_coding
  ENST00000441707 MRRF-007 122264887-122285287 protein_coding
  ENST00000467864 MRRF-009 122270808-122313330 nonsense_mediated_decay
  ENST00000470366 MRRF-008 122264926-122322678 nonsense_mediated_decay
  ENST00000489572 MRRF-002 122270848-122323088 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297908ENST00000344641ENST00000373728ENST00000373729ENST00000394315ENST00000467864ENST00000470366
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297908 N/A N/A N/A 4.700±0.00 6.525±0.00 N/A N/A 6.085±0.00 5.943±0.00 N/A 13.962±0.00 4.396±0.00 8.695±0.00
ENST00000344641 6.711±0.00 4.480±0.00 N/A N/A N/A 3.205±1.61 10.280±0.00 N/A N/A 7.523±0.00 5.654±1.39 2.557±0.00 N/A
ENST00000373728 N/A N/A N/A 2.145±0.00 2.988±0.00 N/A N/A 4.862±0.00 N/A N/A 5.339±0.00 N/A N/A
ENST00000373729 N/A N/A N/A N/A 5.241±0.00 N/A 2.540±0.00 N/A N/A N/A 17.103±0.00 11.640±0.00 21.695±0.00
ENST00000394315 N/A N/A 2.667±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467864 N/A N/A N/A 4.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.375±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N8 CIL_0006N8_0001 CGP 9:122202577-122264839
CIL_0006N9 CIL_0006N9_0001 CGP 9:122237624-122323464
CIL_0006NA CIL_0006NA_0001 CGP 9:122264603-122395703

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0006412 IEA translation
GO:0032790 IDA ribosome disassembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034174 mrrf mitochondrial ribosome recycling factor protein_coding Danio_rerio
ENSMUSG00000026887 Mrrf mitochondrial ribosome recycling factor protein_coding Mus_musculus

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