C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosome recycling factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373728 MRRF-003 ENSG00000148187 9606 + 9:122264914-122291798 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverOvaryENST00000373728
Transcript ID Breast Colon Liver Ovary
ENST00000373728 2.145±0.00 2.988±0.00 4.862±0.00 5.339±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N8 CIL_0006N8_0001 CGP 9:122202577-122264839
CIL_0006N9 CIL_0006N9_0001 CGP 9:122237624-122323464
CIL_0006NA CIL_0006NA_0001 CGP 9:122264603-122395703

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162490 Mrrf-003 processed_transcript Mus_musculus 4e-18 97
ENSMUST00000028250 Mrrf-001 protein_coding Mus_musculus 4e-18 97
ENSMUST00000159051 Gm6374-001 processed_pseudogene Mus_musculus 0.0000000000004 81

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