C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIIC, polypeptide 5, 63kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148308 GTF3C5 9606 + 9:133030675-133058503 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342018 GTF3C5-005 133031004-133058503 protein_coding
  ENST00000372097 GTF3C5-003 133030689-133058503 protein_coding
  ENST00000372099 GTF3C5-201 133030675-133058501 protein_coding
  ENST00000372108 GTF3C5-004 133031004-133058501 protein_coding
  ENST00000435745 GTF3C5-001 133053919-133055342 protein_coding
  ENST00000439697 GTF3C5-007 133031017-133054467 protein_coding
  ENST00000440319 GTF3C5-006 133030711-133052164 protein_coding
  ENST00000461871 GTF3C5-011 133053903-133055347 processed_transcript
  ENST00000485692 GTF3C5-008 133031018-133044407 processed_transcript
  ENST00000489842 GTF3C5-002 133055859-133058130 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342018ENST00000372097ENST00000372099ENST00000372108ENST00000440319ENST00000489842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342018 N/A N/A N/A N/A N/A N/A N/A 1.070±0.00 N/A N/A 1.444±0.00 6.648±0.00 N/A N/A
ENST00000372097 3.762±0.00 N/A N/A 1.800±0.00 2.357±0.00 2.270±1.61 0.640±0.00 N/A 1.528±0.00 0.276±0.00 N/A 11.265±8.13 7.935±1.39 7.316±3.90
ENST00000372099 4.744±0.00 6.320±0.00 N/A 7.998±0.00 7.452±0.00 2.492±0.00 5.977±0.00 3.404±3.19 4.886±0.00 0.810±0.00 8.619±0.00 8.047±0.00 5.072±2.16 10.761±0.00
ENST00000372108 7.899±0.00 14.207±0.00 N/A 10.085±0.00 11.696±0.00 7.417±0.00 7.182±0.00 6.599±6.27 5.587±0.00 7.447±0.00 5.287±4.82 12.365±2.97 8.490±5.03 14.164±0.00
ENST00000440319 N/A N/A 1.204±0.00 N/A N/A N/A N/A N/A N/A 1.874±0.00 4.474±0.00 3.757±0.00 N/A N/A
ENST00000489842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.103±0.00 N/A 7.206±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VE CIL_0002VE_0002 CGP 9:133030675-133087355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000127 IDA transcription factor TFIIIC complex
GO:0003677 IC DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006351 IC transcription, DNA-templated
GO:0006383 IC transcription from RNA polymerase III promoter
GO:0010467 TAS gene expression
GO:0035914 IEA skeletal muscle cell differentiation
GO:0042791 IC 5S class rRNA transcription from RNA polymerase III type 1 promoter
GO:0042797 IC tRNA transcription from RNA polymerase III promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067979 gtf3c5 general transcription factor IIIC, polypeptide 5 protein_coding Danio_rerio
ENSMUSG00000026816 Gtf3c5 general transcription factor IIIC, polypeptide 5 protein_coding Mus_musculus

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