C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, N type, alpha 1B subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148408 CACNA1B 9606 + 9:137877789-138124624 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000277549 CACNA1B-201 137877789-138122179 protein_coding
  ENST00000277551 CACNA1B-002 137877789-138122179 protein_coding
  ENST00000371355 CACNA1B-202 137877934-138124623 protein_coding
  ENST00000371357 CACNA1B-005 137877934-138124624 protein_coding
  ENST00000371363 CACNA1B-003 137877815-138124624 protein_coding
  ENST00000371372 CACNA1B-001 137877789-138124624 protein_coding
  ENST00000413253 CACNA1B-004 138075869-138105778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000277551ENST00000371357
Transcript ID Brain Testis
ENST00000277551 1.058±0.00 N/A
ENST00000371357 1.507±0.11 1.932±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 TAS voltage-gated calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005886 IBA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0007268 IBA synaptic transmission
GO:0007269 IEA neurotransmitter secretion
GO:0007626 IEA locomotory behavior
GO:0008016 IEA regulation of heart contraction
GO:0008022 IPI protein C-terminus binding
GO:0008217 IEA regulation of blood pressure
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0048265 IEA response to pain
GO:0051899 TAS membrane depolarization
GO:0051924 IEA regulation of calcium ion transport
GO:0055085 IEA transmembrane transport
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021735 cacna1ba calcium channel, voltage-dependent, N type, alpha 1B subunit, a protein_coding Danio_rerio
ENSDARG00000079295 cacna1bb calcium channel, voltage-dependent, N type, alpha 1B subunit, b protein_coding Danio_rerio
ENSMUSG00000004113 Cacna1b calcium channel, voltage-dependent, N type, alpha 1B subunit protein_coding Mus_musculus

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