C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, N type, alpha 1B subunit, a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000021735 cacna1ba 7955 - 5:30934886-31126735 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000047719 cacna1ba-001 30934886-31126735 protein_coding
  ENSDART00000141154 cacna1ba-002 30934886-31126735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000047719ENSDART00000141154
Transcript ID Heart Kidney Liver Muscle
ENSDART00000047719 N/A 0.082±0.00 0.011±0.00 N/A
ENSDART00000141154 0.021±0.00 N/A N/A 0.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QH CIL_0000QH_0001 CGP 5:30934886-31153219

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000148408 CACNA1B calcium channel, voltage-dependent, N type, alpha 1B subunit protein_coding Homo_sapiens
ENSMUSG00000004113 Cacna1b calcium channel, voltage-dependent, N type, alpha 1B subunit protein_coding Mus_musculus

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