C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148690 FRA10AC1 9606 - 10:93667883-93702572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359204 FRA10AC1-001 93667883-93702572 protein_coding
  ENST00000460752 FRA10AC1-002 93669624-93675304 processed_transcript
  ENST00000462771 FRA10AC1-003 93670775-93673031 processed_transcript
  ENST00000472153 FRA10AC1-005 93684055-93685463 processed_transcript
  ENST00000482719 FRA10AC1-006 93685253-93687941 processed_transcript
  ENST00000483229 FRA10AC1-004 93669679-93672091 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359204ENST00000460752ENST00000472153ENST00000482719ENST00000483229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359204 6.488±0.00 2.893±0.00 2.221±0.00 5.747±1.92 4.416±0.00 5.307±4.15 2.595±1.33 4.072±0.00 1.989±0.75 1.673±0.65 1.586±0.99 8.244±3.95 3.545±2.19 9.156±2.67
ENST00000460752 N/A 1.061±0.00 N/A N/A 0.951±0.52 0.463±0.00 0.494±0.00 0.355±0.00 0.384±0.21 0.890±0.63 N/A 0.963±0.16 N/A 1.548±0.89
ENST00000472153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.034±0.00 N/A N/A N/A
ENST00000482719 N/A N/A N/A N/A 6.256±0.00 N/A N/A N/A 6.277±0.00 N/A 1.623±0.00 N/A N/A N/A
ENST00000483229 N/A N/A N/A N/A N/A N/A N/A N/A 2.455±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000103 CIL_000103_0001 CGP 10:93612588-93702572
CIL_000104 CIL_000104_0001 CGP 10:93667883-93798159

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016608 fra10ac1 fragile site, folic acid type, rare, candidate 1 protein_coding Danio_rerio
ENSMUSG00000054237 Fra10ac1 FRA10AC1 homolog (human) protein_coding Mus_musculus

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