C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359204 FRA10AC1-001 ENSG00000148690 9606 - 10:93667883-93702572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359204 6.488±0.00 2.893±0.00 2.221±0.00 5.747±1.92 4.416±0.00 5.307±4.15 2.595±1.33 4.072±0.00 1.989±0.75 1.673±0.65 1.586±0.99 8.244±3.95 3.545±2.19 9.156±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000103 CIL_000103_0001 CGP 10:93612588-93702572
CIL_000104 CIL_000104_0001 CGP 10:93667883-93798159

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067167 Fra10ac1-201 protein_coding Mus_musculus 0 1079
ENSDART00000146740 fra10ac1-001 protein_coding Danio_rerio 1.96182e-44 185

Loading