C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SID1 transmembrane family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324225 SIDT2-001 ENSG00000149577 9606 + 11:117178733-117197442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324225
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324225 9.708±0.00 4.164±0.00 0.375±0.00 2.284±0.77 6.449±5.09 4.038±0.00 1.705±0.00 2.627±0.00 2.949±0.00 6.255±0.00 2.207±0.00 10.468±9.22 5.847±0.61 5.619±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003323 IEA type B pancreatic cell development
GO:0005765 IDA lysosomal membrane
GO:0009749 IEA response to glucose
GO:0016021 IEA integral component of membrane
GO:0033227 IEA dsRNA transport
GO:0042593 IEA glucose homeostasis
GO:0044342 IEA type B pancreatic cell proliferation
GO:0051033 IEA RNA transmembrane transporter activity
GO:0061178 IEA regulation of insulin secretion involved in cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038488 Sidt2-001 protein_coding Mus_musculus 0 3493
ENSMUST00000114573 Sidt2-002 protein_coding Mus_musculus 0 2080
ENSMUST00000162072 Sidt2-004 protein_coding Mus_musculus 0 1277
ENSMUST00000160598 Sidt2-014 retained_intron Mus_musculus 0 782
ENSMUST00000160911 Sidt2-003 retained_intron Mus_musculus 0 680
ENSMUST00000160927 Sidt2-013 retained_intron Mus_musculus 0 638
ENSMUST00000160670 Sidt2-011 retained_intron Mus_musculus 0 619
ENSMUST00000160618 Sidt2-012 nonsense_mediated_decay Mus_musculus 0 516
ENSMUST00000162379 Sidt2-006 nonsense_mediated_decay Mus_musculus 0 472
ENSMUST00000159033 Sidt2-005 protein_coding Mus_musculus 0 268

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