C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SID1 transmembrane family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431081 SIDT2-201 ENSG00000149577 9606 + 11:117179223-117197445 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryPlacentaENST00000431081
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENST00000431081 3.216±2.64 4.044±2.99 1.384±0.00 3.209±0.00 0.603±0.00 1.731±0.62 5.814±4.19 1.865±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0033227 IEA dsRNA transport
GO:0051033 IEA RNA transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038488 Sidt2-001 protein_coding Mus_musculus 0 3332
ENSMUST00000114573 Sidt2-002 protein_coding Mus_musculus 0 2067
ENSMUST00000162072 Sidt2-004 protein_coding Mus_musculus 0 1262
ENSMUST00000160598 Sidt2-014 retained_intron Mus_musculus 0 782
ENSMUST00000160911 Sidt2-003 retained_intron Mus_musculus 0 665
ENSMUST00000160927 Sidt2-013 retained_intron Mus_musculus 0 638
ENSMUST00000160670 Sidt2-011 retained_intron Mus_musculus 0 608
ENSMUST00000160618 Sidt2-012 nonsense_mediated_decay Mus_musculus 0 516
ENSMUST00000162379 Sidt2-006 nonsense_mediated_decay Mus_musculus 0 472
ENSMUST00000159033 Sidt2-005 protein_coding Mus_musculus 0 268

Loading