C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149600 COMMD7 9606 - 20:32702691-32743997 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278980 COMMD7-001 32702691-32743997 protein_coding
  ENST00000446419 COMMD7-004 32702703-32743455 protein_coding
  ENST00000474815 COMMD7-005 32704474-32743406 protein_coding
  ENST00000610160 COMMD7-003 32702703-32743445 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278980ENST00000446419ENST00000610160
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278980 N/A N/A N/A 2.367±0.00 1.714±0.00 0.257±0.00 0.686±0.00 1.045±0.00 N/A N/A 0.583±0.00 1.702±1.12 5.093±0.16 N/A
ENST00000446419 13.622±0.00 21.865±0.00 1.774±0.00 7.901±4.35 13.841±11.02 10.235±9.50 11.333±11.06 14.273±11.67 8.751±4.80 7.349±6.07 6.502±2.82 24.867±19.08 43.789±12.64 14.077±1.44
ENST00000610160 N/A 2.662±0.00 0.145±0.00 1.790±0.00 N/A N/A N/A N/A N/A 3.472±0.00 N/A N/A N/A 1.355±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0001 VISTA 20:32224531-32829311
CIL_0008NQ CIL_0008NQ_0001 VISTA 20:32326689-32928341
CIL_0008QN CIL_0008QN_0001 VISTA 20:32676112-33281064
CIL_00036W CIL_00036W_0001 CGP 20:32702691-32809356

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0032088 IDA negative regulation of NF-kappaB transcription factor activity
GO:0033209 IDA tumor necrosis factor-mediated signaling pathway
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051059 IDA NF-kappaB binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036784 commd7 COMM domain containing 7 protein_coding Danio_rerio
ENSMUSG00000056941 Commd7 COMM domain containing 7 protein_coding Mus_musculus

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