C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056941 Commd7 10090 - 2:153616933-153632781 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071852 Commd7-001 153616933-153632781 protein_coding
  ENSMUST00000109782 Commd7-002 153618834-153632740 protein_coding
  ENSMUST00000147822 Commd7-003 153618834-153632731 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071852ENSMUST00000109782ENSMUST00000147822
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071852 3.674±0.76 13.894±4.90 3.211±0.02 3.676±0.42 4.303±2.51 3.209±0.70 1.433±0.41 2.587±0.58 2.828±1.38 3.419±0.93 0.516±0.12 6.334±3.29 2.185±0.83 1.080±0.13
ENSMUST00000109782 4.923±1.14 N/A 9.768±0.95 7.391±0.17 3.987±1.22 3.106±0.55 2.450±0.19 4.547±1.36 4.698±2.23 3.276±1.00 3.984±0.46 5.621±4.12 15.199±5.10 2.023±1.18
ENSMUST00000147822 2.700±0.75 3.924±1.07 2.999±0.30 2.065±1.07 2.425±0.84 1.551±0.20 1.071±0.38 1.230±0.27 1.057±0.26 2.560±0.77 0.401±0.08 2.764±0.82 1.251±0.27 0.705±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0008NQ CIL_0008NQ_0002 VISTA 2:153260290-153861940
CIL_0008QN CIL_0008QN_0002 VISTA 2:153551282-154154369
CIL_00036W CIL_00036W_0002 CGP 2:153616933-153687730

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0032088 IEA negative regulation of NF-kappaB transcription factor activity
GO:0033209 IEA tumor necrosis factor-mediated signaling pathway
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0051059 IEA NF-kappaB binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036784 commd7 COMM domain containing 7 protein_coding Danio_rerio
ENSG00000149600 COMMD7 COMM domain containing 7 protein_coding Homo_sapiens

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