C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151962 RBM46 9606 + 4:154781213-154828813 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281722 RBM46-003 154781213-154828813 protein_coding
  ENST00000510397 RBM46-001 154781505-154828812 protein_coding
  ENST00000512640 RBM46-004 154781817-154798058 protein_coding
  ENST00000514866 RBM46-002 154781213-154827385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000281722ENST00000510397ENST00000512640ENST00000514866
Transcript ID Adipose Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000281722 0.011±0.00 0.006±0.00 0.007±0.00 N/A N/A N/A N/A N/A 1.711±0.39
ENST00000510397 N/A N/A 0.006±0.00 N/A N/A N/A 0.009±0.00 0.028±0.01 N/A
ENST00000512640 N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A
ENST00000514866 N/A 0.008±0.00 0.078±0.00 0.033±0.00 N/A 0.067±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0001 VISTA 4:154359551-154960904
CIL_0000OJ CIL_0000OJ_0002 CGP 4:154626945-154828813
CIL_0000O0 CIL_0000O0_0002 CGP 4:154781213-155217078

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079452 rbm46 RNA binding motif protein 46 protein_coding Danio_rerio
ENSMUSG00000033882 Rbm46 RNA binding motif protein 46 protein_coding Mus_musculus

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