C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033882 Rbm46 10090 - 3:82837228-82876483 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048647 Rbm46-004 82837228-82876483 protein_coding
  ENSMUST00000182637 Rbm46-001 82837815-82866647 protein_coding
  ENSMUST00000182818 Rbm46-002 82837818-82866647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048647ENSMUST00000182637ENSMUST00000182818
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048647 N/A 0.096±0.00 0.082±0.00 N/A 0.058±0.01 0.040±0.02 0.080±0.00 0.124±0.05 0.022±0.00 0.243±0.04 0.638±0.00 7.134±0.94
ENSMUST00000182637 N/A N/A N/A 0.074±0.00 N/A N/A 0.042±0.00 N/A 0.038±0.00 0.133±0.00 N/A 1.733±0.00
ENSMUST00000182818 0.238±0.00 N/A 0.138±0.00 0.141±0.10 N/A 0.052±0.01 0.099±0.05 0.287±0.12 N/A 0.445±0.00 1.007±0.00 3.676±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0002 VISTA 3:82670874-83271669

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079452 rbm46 RNA binding motif protein 46 protein_coding Danio_rerio
ENSG00000151962 RBM46 RNA binding motif protein 46 protein_coding Homo_sapiens

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