C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif protein 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510397 RBM46-001 ENSG00000151962 9606 + 4:154781505-154828812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaENST00000510397
Transcript ID Breast Ovary Placenta
ENST00000510397 0.006±0.00 0.009±0.00 0.028±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0001 VISTA 4:154359551-154960904
CIL_0000OJ CIL_0000OJ_0002 CGP 4:154626945-154828813
CIL_0000O0 CIL_0000O0_0002 CGP 4:154781213-155217078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182637 Rbm46-001 protein_coding Mus_musculus 0 1962
ENSMUST00000048647 Rbm46-004 protein_coding Mus_musculus 0 1864
ENSMUST00000182818 Rbm46-002 protein_coding Mus_musculus 0 1862

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