C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077652-ENSDARG00000079452 CGP 7955 1:9294558-9313555
GeneTranscriptPositionBiotype
ENSDARG00000077652 (LRAT)
lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) 		ENSDART00000152432 (LRAT-001) 9294558-9300295 protein_coding
ENSDARG00000079452 (rbm46)
RNA binding motif protein 46 		ENSDART00000110698 (rbm46-001) 9303266-9313555 protein_coding
CIL_0000OJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121207-ENSG00000151962 CGP 9606 4:154626945-154828813
GeneTranscriptPositionBiotype
ENSG00000121207 (LRAT)
lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) 		ENST00000336356 (LRAT-005) 154743971-154753118 protein_coding
ENST00000499392 (LRAT-001) 154627072-154748320 processed_transcript
ENST00000500890 (LRAT-003) 154626945-154699900 processed_transcript
ENST00000502474 (LRAT-007) 154745374-154749420 processed_transcript
ENST00000502525 (LRAT-002) 154626961-154744533 protein_coding
ENST00000507827 (LRAT-004) 154740838-154751035 protein_coding
ENST00000510733 (LRAT-006) 154744000-154753118 retained_intron
ENST00000510919 (LRAT-008) 154745447-154749180 processed_transcript
ENSG00000151962 (RBM46)
RNA binding motif protein 46 		ENST00000281722 (RBM46-003) 154781213-154828813 protein_coding
ENST00000510397 (RBM46-001) 154781505-154828812 protein_coding
ENST00000512640 (RBM46-004) 154781817-154798058 protein_coding
ENST00000514866 (RBM46-002) 154781213-154827385 protein_coding
ENSG00000249692 (RP11-21G20.4)
 ENST00000502989 (RP11-21G20.4-001) 154770568-154770916 processed_pseudogene
ENSG00000252604 (RNU2-44P)
RNA, U2 small nuclear 44, pseudogene 		ENST00000516795 (RNU2-44P-201) 154790291-154790484 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OJ_0001ENSDARG00000077652ENSDART00000152432ENSDARG00000079452ENSDART00000110698CIL_0000OJ_0002ENSG00000121207ENST00000336356ENST00000499392ENST00000500890ENST00000502474ENST00000502525ENST00000507827ENST00000510733ENST00000510919ENSG00000151962ENST00000281722ENST00000510397ENST00000512640ENST00000514866ENSG00000249692ENST00000502989ENSG00000252604ENST00000516795
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OJ_0001ENSDARG00000077652ENSDART00000152432ENSDARG00000079452ENSDART00000110698CIL_0000OJ_0002ENSG00000121207ENST00000336356ENST00000500890ENST00000502474ENST00000507827ENST00000510733ENSG00000151962ENST00000281722ENST00000510397ENST00000512640ENST00000514866ENSG00000249692ENST00000502989ENSG00000252604ENST00000516795
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077652 ENSDART00000152432 N/A N/A 0.485±0.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079452 ENSDART00000110698 N/A N/A 0.078±0.03 N/A N/A 0.027±0.00 2.536±1.48 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121207 ENST00000336356 N/A N/A N/A N/A 0.014±0.00 0.027±0.00 0.144±0.00 0.159±0.15 N/A 0.010±0.00 0.037±0.00 0.004±0.00 0.288±0.00
ENST00000499392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000500890 N/A N/A N/A N/A N/A 0.023±0.00 0.215±0.00 N/A N/A N/A N/A N/A N/A
ENST00000502474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A
ENST00000502525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507827 N/A 0.022±0.00 N/A N/A N/A N/A 0.528±0.00 N/A N/A N/A N/A 0.007±0.00 N/A
ENST00000510733 N/A N/A 0.377±0.00 0.211±0.00 0.244±0.00 N/A N/A N/A N/A 0.002±0.00 0.231±0.22 0.004±0.00 0.523±0.00
ENST00000510919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151962 ENST00000281722 0.011±0.00 N/A 0.006±0.00 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.711±0.39
ENST00000510397 N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A 0.009±0.00 0.028±0.01 N/A
ENST00000512640 N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514866 N/A N/A 0.008±0.00 0.078±0.00 N/A 0.033±0.00 N/A N/A 0.067±0.00 N/A N/A N/A N/A
ENSG00000249692 ENST00000502989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.278±0.14
ENSG00000252604 ENST00000516795 N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A 0.369±0.00

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