C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chondrolectin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154645 CHODL 9606 + 21:17901263-18267373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299295 CHODL-001 18244833-18267373 protein_coding
  ENST00000338326 CHODL-201 18256502-18267365 protein_coding
  ENST00000400127 CHODL-005 17917340-18267373 protein_coding
  ENST00000400128 CHODL-002 17901263-18267373 protein_coding
  ENST00000400131 CHODL-003 17917340-18267373 protein_coding
  ENST00000400135 CHODL-004 17917340-18267373 protein_coding
  ENST00000543733 CHODL-009 18245875-18266837 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299295ENST00000338326ENST00000400127ENST00000400128ENST00000400135ENST00000543733
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299295 1.282±0.00 0.732±0.00 0.359±0.00 N/A 0.059±0.00 2.172±0.00 0.038±0.00 0.474±0.00 N/A N/A N/A 0.280±0.21 0.447±0.05 10.001±0.72
ENST00000338326 N/A 0.264±0.00 N/A 0.220±0.00 N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A 6.495±2.95
ENST00000400127 N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A 0.451±0.00 N/A N/A N/A 0.232±0.00 N/A
ENST00000400128 N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 0.302±0.00 N/A
ENST00000400135 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A 0.035±0.00 0.233±0.00 N/A N/A N/A
ENST00000543733 N/A N/A N/A N/A 0.115±0.00 0.667±0.00 N/A 0.283±0.00 N/A 0.013±0.00 N/A 0.047±0.00 0.052±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000325 CIL_000325_0001 CGP 21:17788967-18267373
CIL_0000RA CIL_0000RA_0001 CGP 21:17901263-18485879

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0007517 NAS muscle organ development
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034528 chodl chondrolectin protein_coding Danio_rerio
ENSMUSG00000022860 Chodl chondrolectin protein_coding Mus_musculus

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