C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondrolectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338326 CHODL-201 ENSG00000154645 9606 + 21:18256502-18267365 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverTestisENST00000338326
Transcript ID Adrenal Brain Liver Testis
ENST00000338326 0.264±0.00 0.220±0.00 0.136±0.00 6.495±2.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000325 CIL_000325_0001 CGP 21:17788967-18267373
CIL_0000RA CIL_0000RA_0001 CGP 21:17901263-18485879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0007517 NAS muscle organ development
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114216 Chodl-003 protein_coding Mus_musculus 0 678
ENSMUST00000069148 Chodl-002 protein_coding Mus_musculus 0 678
ENSMUST00000023568 Chodl-001 protein_coding Mus_musculus 0 678

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