C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chondrolectin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022860 Chodl 10090 + 16:78930948-78951733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023568 Chodl-001 78930948-78951733 protein_coding
  ENSMUST00000069148 Chodl-002 78930948-78949904 protein_coding
  ENSMUST00000114216 Chodl-003 78930948-78947155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023568ENSMUST00000069148ENSMUST00000114216
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023568 1.192±0.83 N/A 8.770±0.34 0.871±0.40 0.166±0.08 0.458±0.22 0.039±0.00 0.016±0.00 0.031±0.02 0.174±0.00 0.946±0.22 0.211±0.00 0.034±0.01 0.005±0.00
ENSMUST00000069148 N/A N/A 2.266±0.09 0.281±0.01 N/A 0.336±0.09 N/A 0.036±0.00 0.027±0.02 N/A 0.733±0.17 0.054±0.01 N/A 0.042±0.01
ENSMUST00000114216 1.711±1.16 0.143±0.04 N/A N/A 0.270±0.01 1.628±0.48 0.057±0.04 0.069±0.04 N/A 0.048±0.01 N/A 0.666±0.30 0.049±0.02 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000325 CIL_000325_0002 CGP 16:78544012-78951733
CIL_0000RA CIL_0000RA_0002 CGP 16:78930948-79091097

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034528 chodl chondrolectin protein_coding Danio_rerio
ENSG00000154645 CHODL chondrolectin protein_coding Homo_sapiens

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