C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondrolectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299295 CHODL-001 ENSG00000154645 9606 + 21:18244833-18267373 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyOvaryPlacentaTestisENST00000299295
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000299295 1.282±0.00 0.732±0.00 0.359±0.00 0.059±0.00 2.172±0.00 0.038±0.00 0.474±0.00 0.280±0.21 0.447±0.05 10.001±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000325 CIL_000325_0001 CGP 21:17788967-18267373
CIL_0000RA CIL_0000RA_0001 CGP 21:17901263-18485879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0007517 NAS muscle organ development
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023568 Chodl-001 protein_coding Mus_musculus 0 1243
ENSMUST00000069148 Chodl-002 protein_coding Mus_musculus 0 872
ENSMUST00000114216 Chodl-003 protein_coding Mus_musculus 0 869

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