C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neural cell adhesion molecule 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154654 NCAM2 9606 + 21:20998315-21543329 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000284894 NCAM2-201 21280576-21540195 protein_coding
  ENST00000400546 NCAM2-001 20998315-21543329 protein_coding
  ENST00000461281 NCAM2-003 21290077-21338478 processed_transcript
  ENST00000484983 NCAM2-002 21463741-21468783 processed_transcript
  ENST00000486367 NCAM2-004 21239342-21292190 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284894ENST00000400546ENST00000461281ENST00000486367
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284894 0.212±0.00 0.050±0.00 N/A 11.211±0.90 0.179±0.13 0.891±0.37 0.373±0.08 0.716±0.64 0.319±0.27 0.852±0.48 0.088±0.08 0.147±0.03 0.114±0.12 3.717±1.34
ENST00000400546 N/A 0.057±0.00 N/A 6.387±1.33 0.112±0.07 0.334±0.00 0.264±0.03 0.033±0.00 0.250±0.00 0.590±0.06 N/A 0.016±0.00 0.025±0.01 0.365±0.07
ENST00000461281 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.00 0.072±0.00 0.451±0.00 N/A N/A
ENST00000486367 N/A N/A 0.073±0.00 N/A 1.982±0.00 N/A N/A N/A N/A N/A 0.173±0.00 N/A 0.057±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R9 CIL_0000R9_0001 CGP 21:18269116-21543329

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007158 TAS neuron cell-cell adhesion
GO:0007413 IEA axonal fasciculation
GO:0007608 IEA sensory perception of smell
GO:0016021 IEA integral component of membrane
GO:0030424 IEA axon

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017466 ncam2 neural cell adhesion molecule 2 protein_coding Danio_rerio
ENSDARG00000055669 NCAM2 (2 of 2) neural cell adhesion molecule 2 protein_coding Danio_rerio
ENSMUSG00000022762 Ncam2 neural cell adhesion molecule 2 protein_coding Mus_musculus

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