C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural cell adhesion molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400546 NCAM2-001 ENSG00000154654 9606 + 21:20998315-21543329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000400546
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000400546 0.057±0.00 6.387±1.33 0.112±0.07 0.334±0.00 0.264±0.03 0.033±0.00 0.250±0.00 0.590±0.06 0.016±0.00 0.025±0.01 0.365±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R9 CIL_0000R9_0001 CGP 21:18269116-21543329

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007158 TAS neuron cell-cell adhesion
GO:0007413 IEA axonal fasciculation
GO:0007608 IEA sensory perception of smell
GO:0016021 IEA integral component of membrane
GO:0030424 IEA axon

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067602 Ncam2-002 protein_coding Mus_musculus 0 3330
ENSMUST00000037785 Ncam2-001 protein_coding Mus_musculus 0 2628

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