C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000R9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154646-ENSG00000154654 CGP 9606 21:18269116-21543329
GeneTranscriptPositionBiotype
ENSG00000154646 (TMPRSS15)
transmembrane protease, serine 15 		ENST00000284885 (TMPRSS15-001) 18269116-18403656 protein_coding
ENST00000422787 (TMPRSS15-002) 18365140-18485879 protein_coding
ENST00000474775 (TMPRSS15-003) 18365241-18460731 protein_coding
ENSG00000154654 (NCAM2)
neural cell adhesion molecule 2 		ENST00000284894 (NCAM2-201) 21280576-21540195 protein_coding
ENST00000400546 (NCAM2-001) 20998315-21543329 protein_coding
ENST00000461281 (NCAM2-003) 21290077-21338478 processed_transcript
ENST00000484983 (NCAM2-002) 21463741-21468783 processed_transcript
ENST00000486367 (NCAM2-004) 21239342-21292190 processed_transcript
ENSG00000198618 (PPIAP22)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 22 		ENST00000358455 (PPIAP22-001) 18857779-18858276 processed_pseudogene
ENSG00000215351 (PPIAP1)
peptidylprolyl isomerase A (cyclophilin A), pseudogene 1 		ENST00000448832 (PPIAP1-001) 20828127-20828622 processed_pseudogene
ENSG00000215353 (C1QBPP)
complement component 1, q subcomponent binding protein, pseudogene 		ENST00000400117 (C1QBPP-001) 19759359-19760128 processed_pseudogene
ENSG00000224141 (AL109763.2)
 ENST00000355189 (AL109763.2-002) 18561615-18759804 lincRNA
ENST00000414582 (AL109763.2-003) 18612062-18753028 lincRNA
ENST00000437492 (AL109763.2-001) 18561265-18760003 lincRNA
ENSG00000224924 (LINC00320)
long intergenic non-protein coding RNA 320 		ENST00000416768 (LINC00320-001) 20742590-20803063 lincRNA
ENST00000419299 (LINC00320-005) 20743739-20803086 lincRNA
ENST00000435279 (LINC00320-003) 20742921-20803216 lincRNA
ENST00000437238 (LINC00320-002) 20742595-20803098 lincRNA
ENST00000452561 (LINC00320-004) 20742921-20803070 lincRNA
ENSG00000226771 (AP001136.2)
 ENST00000425058 (AP001136.2-001) 21223295-21226829 antisense
ENSG00000226818 (SLC6A6P1)
solute carrier family 6, member 6 pseudogene 1 		ENST00000413933 (SLC6A6P1-001) 19244543-19246392 processed_pseudogene
ENSG00000229289 (AP000431.2)
 ENST00000424219 (AP000431.2-001) 19130523-19134423 lincRNA
ENSG00000229336 (AP000568.2)
 ENST00000282964 (AP000568.2-001) 19739709-19740150 processed_pseudogene
ENSG00000231620 (AP000855.4)
 ENST00000433210 (AP000855.4-001) 19301613-19303739 lincRNA
ENSG00000232193 (AL157359.4)
 ENST00000440372 (AL157359.4-001) 18917934-18935859 lincRNA
ENSG00000233236 (AP001171.1)
 ENST00000436373 (AP001171.1-001) 20256752-20258820 lincRNA
ENSG00000233480 (AP000946.2)
 ENST00000443479 (AP000946.2-001) 19893279-19899755 lincRNA
ENSG00000233676 (FDPSP6)
farnesyl diphosphate synthase pseudogene 6 		ENST00000425091 (FDPSP6-001) 20388334-20388845 processed_pseudogene
ENSG00000234439 (KRT18P2)
keratin 18 pseudogene 2 		ENST00000447938 (KRT18P2-001) 20424949-20426206 processed_pseudogene
ENSG00000271486 (AP000403.3)
 ENST00000603349 (AP000403.3-001) 19620695-19621545 processed_pseudogene
CIL_0000R9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022857-ENSMUSG00000022762 CGP 10090 16:78953008-81624285
GeneTranscriptPositionBiotype
ENSMUSG00000022762 (Ncam2)
neural cell adhesion molecule 2 		ENSMUST00000037785 (Ncam2-001) 81200697-81597805 protein_coding
ENSMUST00000067602 (Ncam2-002) 81200697-81624285 protein_coding
ENSMUSG00000022857 (Tmprss15)
transmembrane protease, serine 15 		ENSMUST00000023566 (Tmprss15-001) 78953008-79091092 protein_coding
ENSMUST00000060402 (Tmprss15-002) 78953464-79091097 protein_coding
ENSMUSG00000085094 (Gm15692)
predicted gene 15692 		ENSMUST00000152173 (Gm15692-001) 78964114-78964465 processed_pseudogene
ENSMUSG00000088476 (Gm23083)
predicted gene, 23083 		ENSMUST00000157851 (Gm23083-201) 80137352-80137467 snoRNA
ENSMUSG00000097552 (Rps19-ps12)
ribosomal protein S19, pseudogene 12 		ENSMUST00000181937 (Rps19-ps12-001) 79914460-79914889 processed_pseudogene
ENSMUSG00000101810 (RP23-391E17.2)
RIKEN cDNA 1700066C05 gene 		ENSMUST00000191029 (RP23-391E17.2-001) 79999376-80000546 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R9_0001ENSG00000154646ENST00000284885ENST00000422787ENST00000474775ENSG00000154654ENST00000284894ENST00000400546ENST00000461281ENST00000484983ENST00000486367ENSG00000198618ENST00000358455ENSG00000215351ENST00000448832ENSG00000215353ENST00000400117ENSG00000224141ENST00000355189ENST00000414582ENST00000437492ENSG00000224924ENST00000416768ENST00000419299ENST00000435279ENST00000437238ENST00000452561ENSG00000226771ENST00000425058ENSG00000226818ENST00000413933ENSG00000229289ENST00000424219ENSG00000229336ENST00000282964ENSG00000231620ENST00000433210ENSG00000232193ENST00000440372ENSG00000233236ENST00000436373ENSG00000233480ENST00000443479ENSG00000233676ENST00000425091ENSG00000234439ENST00000447938ENSG00000271486ENST00000603349CIL_0000R9_0002ENSMUSG00000022762ENSMUST00000037785ENSMUST00000067602ENSMUSG00000022857ENSMUST00000023566ENSMUST00000060402ENSMUSG00000085094ENSMUST00000152173ENSMUSG00000088476ENSMUST00000157851ENSMUSG00000097552ENSMUST00000181937ENSMUSG00000101810ENSMUST00000191029
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R9_0001ENSG00000154646ENST00000284885ENST00000422787ENST00000474775ENSG00000154654ENST00000284894ENST00000400546ENST00000461281ENST00000486367ENSG00000198618ENST00000358455ENSG00000215351ENST00000448832ENSG00000215353ENST00000400117ENSG00000224141ENST00000355189ENST00000414582ENST00000437492ENSG00000224924ENST00000416768ENST00000419299ENST00000437238ENST00000452561ENSG00000226771ENST00000425058ENSG00000226818ENST00000413933ENSG00000229289ENST00000424219ENSG00000229336ENST00000282964ENSG00000231620ENST00000433210ENSG00000232193ENST00000440372ENSG00000233236ENST00000436373ENSG00000233480ENST00000443479ENSG00000233676ENST00000425091ENSG00000234439ENST00000447938ENSG00000271486ENST00000603349CIL_0000R9_0002ENSMUSG00000022762ENSMUST00000037785ENSMUST00000067602ENSMUSG00000022857ENSMUST00000023566ENSMUST00000060402ENSMUSG00000085094ENSMUST00000152173ENSMUSG00000088476ENSMUST00000157851ENSMUSG00000097552ENSMUST00000181937ENSMUSG00000101810ENSMUST00000191029
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154646 ENST00000284885 0.020±0.00 0.002±0.00 N/A 0.033±0.00 N/A 0.015±0.00 N/A N/A 0.011±0.00 N/A N/A 0.030±0.00 N/A 0.094±0.00
ENST00000422787 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A
ENST00000474775 N/A N/A N/A 0.175±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154654 ENST00000284894 0.212±0.00 0.050±0.00 N/A 11.211±0.90 0.179±0.13 0.891±0.37 0.373±0.08 0.716±0.64 0.319±0.27 0.852±0.48 0.088±0.08 0.147±0.03 0.114±0.12 3.717±1.34
ENST00000400546 N/A 0.057±0.00 N/A 6.387±1.33 0.112±0.07 0.334±0.00 0.264±0.03 0.033±0.00 0.250±0.00 0.590±0.06 N/A 0.016±0.00 0.025±0.01 0.365±0.07
ENST00000461281 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.00 0.072±0.00 0.451±0.00 N/A N/A
ENST00000484983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486367 N/A N/A 0.073±0.00 N/A 1.982±0.00 N/A N/A N/A N/A N/A 0.173±0.00 N/A 0.057±0.00 N/A
ENSG00000198618 ENST00000358455 0.063±0.00 0.066±0.00 N/A 0.468±0.36 0.067±0.00 0.061±0.00 0.030±0.00 0.100±0.00 1.100±0.00 0.095±0.00 0.057±0.00 1.327±1.46 N/A 0.062±0.00
ENSG00000215351 ENST00000448832 0.141±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215353 ENST00000400117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A
ENSG00000224141 ENST00000355189 N/A 0.323±0.00 N/A N/A N/A 0.048±0.00 N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A
ENST00000414582 0.149±0.00 N/A N/A 0.140±0.00 N/A 0.211±0.16 0.211±0.09 0.115±0.00 N/A N/A N/A 0.107±0.07 0.081±0.00 0.189±0.07
ENST00000437492 0.030±0.00 0.128±0.00 0.052±0.00 N/A 0.076±0.00 0.049±0.01 0.071±0.00 0.046±0.00 N/A 0.113±0.00 0.032±0.02 0.055±0.02 0.056±0.00 0.128±0.06
ENSG00000224924 ENST00000416768 N/A N/A N/A 4.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419299 0.039±0.00 N/A N/A 4.689±1.45 0.024±0.00 0.023±0.00 0.071±0.00 0.050±0.00 0.033±0.00 0.086±0.00 N/A N/A N/A 0.141±0.00
ENST00000435279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00
ENST00000452561 N/A N/A N/A 4.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00
ENSG00000226771 ENST00000425058 N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00
ENSG00000226818 ENST00000413933 N/A N/A N/A 0.025±0.00 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A 1.215±0.77
ENSG00000229289 ENST00000424219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.04
ENSG00000229336 ENST00000282964 N/A 0.387±0.00 N/A 0.082±0.00 0.522±0.00 0.179±0.00 0.062±0.00 0.309±0.00 0.140±0.00 0.724±0.00 0.021±0.00 1.228±1.18 1.320±0.00 1.098±0.49
ENSG00000231620 ENST00000433210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00
ENSG00000232193 ENST00000440372 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.01
ENSG00000233236 ENST00000436373 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A
ENSG00000233480 ENST00000443479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.33
ENSG00000233676 ENST00000425091 N/A N/A N/A N/A 0.038±0.00 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234439 ENST00000447938 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 0.161±0.00 N/A 0.017±0.00 N/A N/A
ENSG00000271486 ENST00000603349 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022762 ENSMUST00000037785 0.067±0.00 N/A 0.009±0.00 N/A 0.072±0.00 N/A 0.026±0.01 0.040±0.00 0.057±0.06 0.033±0.01 N/A 0.027±0.01 0.005±0.00 0.005±0.00
ENSMUST00000067602 0.036±0.02 0.187±0.03 0.042±0.00 12.759±8.06 0.100±0.03 0.187±0.08 0.022±0.02 0.231±0.07 0.106±0.10 0.044±0.00 0.010±0.00 0.088±0.05 0.012±0.00 0.033±0.01
ENSMUSG00000022857 ENSMUST00000023566 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000060402 N/A N/A 0.002±0.00 0.005±0.00 N/A N/A N/A N/A 0.001±0.00 N/A 0.011±0.00 N/A N/A 0.034±0.02
ENSMUSG00000085094 ENSMUST00000152173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.065±0.00
ENSMUSG00000088476 ENSMUST00000157851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1480.120±0.00
ENSMUSG00000097552 ENSMUST00000181937 N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.04 0.110±0.00
ENSMUSG00000101810 ENSMUST00000191029 N/A N/A 0.032±0.00 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A 0.191±0.04 N/A N/A

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