C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573955 USP43-004 ENSG00000154914 9606 + 17:9701115-9729684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000573955
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000573955 0.081±0.00 0.238±0.00 0.334±0.00 0.233±0.00 0.323±0.28 0.362±0.30 0.591±0.34 0.062±0.00 0.265±0.00 7.820±6.49 1.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LE CIL_0001LE_0002 CGP 17:9576627-9729691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021288 Usp43-001 protein_coding Mus_musculus 0 1018
ENSMUST00000108677 Usp43-004 protein_coding Mus_musculus 0 928
ENSMUST00000129961 Usp43-002 retained_intron Mus_musculus 0 625

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