C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mesoderm induction early response 1, family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155545 MIER3 9606 - 5:56919602-56971675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336942 MIER3-008 56935671-56952203 protein_coding
  ENST00000381199 MIER3-004 56919604-56952113 protein_coding
  ENST00000381213 MIER3-001 56919603-56952125 protein_coding
  ENST00000381226 MIER3-003 56919602-56952118 protein_coding
  ENST00000409421 MIER3-005 56922584-56941133 protein_coding
  ENST00000440000 MIER3-011 56947031-56971675 protein_coding
  ENST00000451637 MIER3-007 56935744-56938971 nonsense_mediated_decay
  ENST00000452157 MIER3-002 56919604-56952122 nonsense_mediated_decay
  ENST00000480115 MIER3-006 56938814-56952112 retained_intron
  ENST00000497185 MIER3-010 56947032-56971675 processed_transcript
  ENST00000546593 MIER3-009 56947031-56971675 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381199ENST00000381213ENST00000381226ENST00000409421ENST00000452157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381199 1.767±0.00 0.989±0.00 N/A 1.595±0.30 2.093±0.26 2.688±2.13 0.942±0.34 2.968±1.09 N/A 1.728±0.27 N/A 1.627±0.35 0.956±0.16 4.057±1.80
ENST00000381213 0.504±0.00 0.808±0.00 N/A 1.039±0.00 0.652±0.16 5.300±0.00 N/A N/A 0.702±0.52 2.918±0.00 2.127±0.00 1.594±0.74 0.603±0.30 3.260±1.41
ENST00000381226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A
ENST00000409421 N/A N/A 1.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.745±0.00 7.632±0.00
ENST00000452157 N/A 1.079±0.00 N/A N/A N/A 4.346±0.00 N/A 0.704±0.00 1.362±0.79 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089D CIL_00089D_0001 VISTA 5:56348801-56951831
CIL_0007FY CIL_0007FY_0002 CGP 5:56909260-56971675

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006253 mier3 mesoderm induction early response 1, family member 3 protein_coding Danio_rerio
ENSDARG00000021288 MIER3 (2 of 2) mesoderm induction early response 1, family member 3 protein_coding Danio_rerio
ENSMUSG00000032727 Mier3 mesoderm induction early response 1, family member 3 protein_coding Mus_musculus

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